Year: 2013
Type: article
Abstract: PDBsum, http://www.ebi.ac.uk/pdbsum, is a website providing numerous pictorial analyses of each entry in the Protein Data Bank. It portrays the structural features of all proteins, DNA and ligands in the entry, as well as depicting the interactions between them. The latest features, described here, include annotation of human protein sequences with their naturally occurring amino acid variants, dynamic graphs showing the relationships between related protein domain architectures, analyses of ligand binding clusters across different experimental determinations of the same protein, analyses of tunnels in proteins and new search options.
Source: Nucleic Acids Research
DOI: 10.1093/nar/gkt940
Language: English
Subfield: Structural Biology
Domain: Life Sciences
Open Access status: gold
Estimated APC paid: $3,992
Funders: U.S. Department of Energy, U.S. Department of Health and Human Services, European Bioinformatics Institute, Grantová Agentura České Republiky, National Institutes of Health, European Regional Development Fund, National Institute of General Medical Sciences, National Institute of Allergy and Infectious Diseases, Biological and Environmental Research, European Social Fund
Awards: G102163711, G1682028285, G262962599, G2857925935, G2933538316, G2934285047, G297113853, Controlling structure and function of biomolecules at the molecular scale: theory meets experiment, G3757336129, G4030212589, G4336488413, G4564258647, Midwest Center for Structural Genomics, G618456414, G6461011143, G6601593777, G6848031779, G7312179196, G7505410320, G969889393
OpenAlex ID: W4240895940