Big-Scape/Corason Tutorial
Year: 2018
Type: article
Abstract: This is a data set prepared for the tutorial of the genome mining tools BiG-SCAPE/CORASON. Actinobacteria genomes and biosynthetical gene clusters (BGCs) information are stored in gbk files. Aminoacid sequence of query enzyme TauD from Streptomyces sp. NRRL B-1347 is provided here as fasta file. Content is organized here in three directories as follows: i) genomes.tar.gz 14 Actinobacteria genome files (gbk files) 1 Spectinomycin BGC from MIBiG database (gbk file) ii) gbk.tar.gz 22 BGCs selected from the antiSMASH output of the 14 genomes in genome directory. 1 Spectinomycin BGC from MIBiG database (gbk file) iii) TauD Aminoacid sequence of Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17) from Streptomyces sp. NRRL B-1347
Authors: Navarro, Jorge, Selem, Nelly, Mullowney, Michael, Cruz-Morales Pablo, Parkinson Elizabeth, Tryon Hudson, Kautsar Satria, De Los Santos Emmanuel, L.C., Marley, Yeong, Abubucker Sahar, Roeters Arne, Lokhorst Wouter, Fernandez-Guerra Antonio, Teresa, Dias Cappelini Luciana, Thomson Regan, Metcalf William, W., Kelleher Neil, L., Barona-Gomez Francisco, Medema Marnix, H.
Language: English
Subfield: Pharmacology
Field: Medicine
Domain: Health Sciences
Open Access status: green
OpenAlex ID: W6968074603