Work

Treenome Browser: co-visualization of enormous phylogenies and millions of genomes

Year: 2022

Type: article

Abstract: SUMMARY: Treenome Browser is a web browser tool to interactively visualize millions of genomes alongside huge phylogenetic trees. AVAILABILITY AND IMPLEMENTATION: Treenome Browser for SARS-CoV-2 can be accessed at cov2tree.org, or at taxonium.org for user-provided trees. Source code and documentation are available at github.com/theosanderson/taxonium and docs.taxonium.org/en/latest/treenome.html. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.

Source: Bioinformatics

DOI: 10.1093/bioinformatics/btac772

Authors: Alexander M Kramer, Theo Sanderson, Russell Corbett-Detig

Institutions: University of California, Santa Cruz, The Francis Crick Institute

Language: English

Topic: Genomics and Phylogenetic Studies

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: hybrid

Estimated APC paid: $3,618

Funders: Wellcome Trust, Francis Crick Institute, Cancer Research UK, Centers for Disease Control and Prevention