Supplemental materials from Software for the Integration of Multiomics Experiments in Bioconductor
Year: 2023
Type: supplementary-materials
Abstract: Supplementary Methods and Example Analyses. This file provides additional detail on the MultiAssayExperiment data class, methods of preparation of the TCGA objects, methods and additional results for the example analyses. It includes Supplemental Figures 1-2 (Mogsa enrichment scores for Hallmark gene sets), Supplemental Figure 3 (correlation between copy number, mRNA, and protein profiles for the NCI-60 cell lines), Supplemental Table 1 (comparison between the features of MultiAssayExperiment and MultiDataSet), Supplemental Table 2 (summary table of TCGA datasets), and Supplemental Table 3 (elements of the MultiAssayExperiment data class).
Authors: Marcel Ramos, Lucas Schiffer, Angela Re, Rimsha Azhar, Azfar Basunia, Carmen Rodriguez, Tiffany Chan, Phil Chapman, Sean R. Davis, David Gomez-Cabrero, Aedin C. Culhane, Benjamin Haibe-Kains, Kasper D. Hansen, Hanish Kodali, Marie S. Louis, Arvind S. Mer, Markus Riester, Martin Morgan, Vince Carey, Levi Waldron
Language: English
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: gold
OpenAlex ID: W4361876312