Work

Trans-acting aptazyme for conditional gene knockdown in eukaryotic cells

Year: 2023
Type: article
Abstract: Trans -acting hammerhead ribozyme inherits the advantages of being the smallest and best-characterized RNA-cleaving ribozyme, offering high modularity and the ability to cleave any desired sequence without the aid of any protein, as long as the target sequence contains a cleavage site. However, achieving precise control over the trans- acting hammerhead ribozyme would enable safer and more accurate regulation of gene expression. Herein, we described an intracellular selection of hammerhead aptazyme that contains a theophylline aptamer on stem II based on toxin protein IbsC. Based on the intracellular selection, we obtained three new cis- acting hammerhead aptazymes. Moreover, the corresponding trans- acting aptazymes could be efficiently induced by theophylline to knock down different targeted genes in eukaryotic cells. Notably, the best one, T195, exhibited a ligand-dependent and dose-dependent response to theophylline, and the cleavage efficiency could be enhanced by incorporating multiplex aptazymes.
Language: English
Open Access status: gold
Estimated APC paid: $3,900
OpenAlex ID: W4384460990
FWCI: 0.865
Cites: 32
Cited by: 10
Related to: 10