Work

Supplementary Fig 3 from Whole genome CpG-resolution DNA methylation profiling of HNSCC reveals distinct mechanisms of carcinogenesis for fine-scale HPV+ cancer subtypes

Year: 2023

Type: supplementary-materials

Abstract: Comparison of locations of positive versus negative cis-eQTMs that overlap with DMRs for: IMU vs HPV(-) (1st row), IMU vs KRT (2nd row), and KRT vs HPV(-) (3rd row) of each panel. (A) CpG island annotations; (B) genic annotations. 1st and 2nd columns are hypermethylated in the first comparison group; 3rd and 4th columns are hypomethylated in the first comparison group. Negative eQTMs are in the 1st and 3rd columns, while positive eQTMs are in the 2nd and 4th columns.

DOI: 10.1158/2767-9764.23899653

Authors: Tingting Qin, Shiting Li, Leanne E Henry, Elysia Chou, Raymond G Cavalcante, Bailey F Garb, Nisha J. D'Silva, Laura S. Rozek, Maureen A Sartor

Language: English

Topic: Epigenetics and DNA Methylation

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

SDG: Good health and well-being

Open Access status: gold

OpenAlex ID: W4385637374

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