Microbe Profile: The Lactobacillaceae
Year: 2023
Type: article
Abstract: Graphical abstract Phylogeny, host association and genome size in the Lactobacillaceae . The phylogenetic tree of 287 unique species and 15 strains with unassigned species was built using concatenated alignment of amino acid sequences of core genes, produced by SCARAP ( https://journals.asm.org/doi/10.1128/msystems.00264-19 ) as an input into IQ-TREE2 ( https://academic.oup.com/mbe/article/37/5/1530/5721363 ) with model parameters are described in []. Coloured branches represent species divisions established in []. Coloured taxon labels indicate major clades and recently established genera. The solid circles by the species names represent genome sizes. The coloured bands on the outer ring indicate the typical habitat based on data in [].
Source: Microbiology
DOI: 10.1099/mic.0.001414
Authors: Jens Walter, Paul W. O'Toole
Institutions: University College Cork, APC Microbiome Institute
Language: English
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: diamond
Funder: Science Foundation Ireland
OpenAlex ID: W4389674631