Work

Mapping and modeling the genomic basis of differential RNA isoform expression at single-cell resolution with LR-Split-seq

Year: 2021

Type: dataset

Abstract: These data make up the UCSC Genome Browser track hub used in our publication. These 36 files include: snATAC-seq pseudobulk peaks across 18 clusters (bigwigs) Merged psuedobulk snATAC-seq peaks across all clusters (bigBeg) TSS regions called from LR-Split-seq (bigBed) ENCODE cCREs (bigBed) LR-Split-seq reads across 7 clusters, used to call TSSs (bams and bam indices) Comprehensive set of GENCODE vM21 (bigBed)

Source: Figshare

DOI: 10.5281/zenodo.4720583

Authors: Rebboah, Elisabeth, Fairlie Reese, Williams, Katherine, Balderrama-Gutierrez, Gabriela, McGill, Cassandra, Trout, Diane, Isaryhia Rodriguez, Liang, Heidi, Wold, Barbara, Mortazavi, Ali

Institutions: University of California, Irvine, California Institute of Technology

Language: English

Topic: Single-cell and spatial transcriptomics

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: green

OpenAlex ID: W4393510935

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