Metabolomics WorkBench Compound Dictionary
Year: 2022
Type: dataset
Abstract: mwTAB file for each study in the Metabolomics Workbench (https://www.metabolomicsworkbench.org/) was processed through an automated data merging pipeline. It yielded - ~148,403 unique chemical names ~12,000 PubChem CIDs ~13000 KEGG IDs ~5000 CAS Numbers ~4200 HMDB IDs - 121 unique species - 136 unique sample type ~77K chemical names still need to be curated and linked with appropriate chemical identifiers. - 6800 unique chemical names for human blood studies ~1400 unique chemical names reported for > 10 human blood studies Note: workbench_curated_compound_list.csv contains some of the curated compound names. Basic curation has happened to connect metabolites names to PubChem identifiers.
Author: Barupal, Dinesh
Institution: Icahn School of Medicine at Mount Sinai
Language: English
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: green
OpenAlex ID: W4393721644