Work

HiCube: Interactive visualization of multiscale and multimodal Hi-C and 3D genome data

Year: 2023

Type: dataset

Abstract: Test dataset for HiCube. HiCube is a lightweight web application for interactive visualization and exploration of diverse types of genomics data at multiscale resolutions. Especially, HiCube displays synchronized views of Hi-C contact maps and three-dimensional (3D) genome structures with user-friendly annotation and configuration tools, thereby facilitating the study of 3D genome organization and function. HiCube is implemented in Javascript and can be installed via NPM. The source code is freely available at GitHub (https://github.com/wmalab/HiCube).

Source: Zenodo (CERN European Organization for Nuclear Research)

DOI: 10.5281/zenodo.7601097

Authors: Ye, Tiantian, Hu, Yangyang, Pun, Sydney, Ma, Wenxiu

Institution: University of California, Riverside

Language: English

Topic: Genomics and Chromatin Dynamics

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: green

OpenAlex ID: W4394053900

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