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Additional file 7 of The Local Edge Machine: inference of dynamic models of gene regulation

Year: 2016

Type: dataset

Abstract: Table: Saccharomyces cerevisiae gene expression dynamics used in this study. The wild-type gene expression data of 28 genes over approximately two cell cycles were obtained from previous work [2]. Expression values from each profile were smoothed from 13 experimental time points to 40 time points by fitting a cubic spline (the function splinefun in R package stats). A Rescon Ltd. tool was used to rank the splined profiles by 50 % of the peak expression value. Genes are ordered from earliest (top) to latest (bottom) half-maximal expression and presented in the heat map in Fig. 1. (XLSX 51 kb)

Source: Figshare

DOI: 10.6084/m9.figshare.c.3611879_d11

Authors: McGoff, Kevin, Guo, Xin, Deckard, Anastasia, Kelliher, Christina, Leman, Adam, Francey, Lauren, Hogenesch, John, Haase, Steven, Harer, John

Language: English

Topic: Gene Regulatory Network Analysis

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: green

OpenAlex ID: W4394090577

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