Additional file 2: of Longitudinal immunosequencing in healthy people reveals persistent T cell receptors rich in highly public receptors
Year: 2019
Type: dataset
Abstract: Table S1. Overall TCRβ-sequencing statistics per sample: sequencing depth, productive TCRβ sequencing depth, fraction of productive TCRβ sequences, unique V genes identified, unique J genes identified, unique CDR3 sequences, unique TCRβs, unique TCRβ nucleotide sequences. Table S2. V gene usage across subject and T cell population, expressed as both a fraction of all unique productive TCRβs and as a mean total abundance per sample. Table S3. J gene usage across subject and T cell population, expressed as both a fraction of all unique productive TCRβs and as a mean total abundance per sample. Table S4. Sequence and abundance information for the largest cohort of closely correlated TCRβs identified in each individual by Spearman’s or Pearson’s correlation. Table S5. The fraction of TCRβs in each sample that occurred in 1–8 samples from that subject’s time series. Table S6. Mann-Whitney U test statistics for mean abundance of TCRβs occurring in different numbers of samples during the time series. Table S7. Mann-Whitney U test statistics for nucleotide redundancy of TCRβs occurring in different numbers of samples during the time series. Table S8. The fraction of TCRβs in each sample that were shared to different degrees among subjects in a large, independent cohort. (XLSX 80 kb)
Source: Figshare
Language: English
Topic: T-cell and B-cell Immunology
Subfield: Immunology
Field: Immunology and Microbiology
Domain: Life Sciences
Open Access status: green
OpenAlex ID: W4394373146