Additional file 2: Figure S2. of Composition and dynamics of the respiratory tract microbiome in intubated patients
Year: 2016
Type: dataset
Abstract: Comparison of Illumina MiSeq and Roche/454 sequencing applied to identical samples. (A) Subjects 1–5 had upper and lower respiratory tract samples 16S rRNA gene sequencing performed on both the Illumina MiSeq and Roche/454 platforms. A heatmap displays family-level taxonomic assignment (as in Fig. 2). Vertical black lines separate each sample pair, allowing direct comparison of results obtained across the two sequencing platforms. (B) Procrustes analysis comparing weighted, normalized UniFrac distances calculated from the closed-reference OTUs formed from each sequencing platform. Balls indicate samples, colored by subject (red—subject 001, blue—subject 002, orange—subject 003, green—subject 004, purple—subject 005); edges connect the results of sequencing on Roche/454 and Illumina MiSeq platforms. Procrustes m2 was 0.13 (p
Source: Figshare
Language: English
Topic: Nosocomial Infections in ICU
Field: Medicine
Domain: Health Sciences
Open Access status: green
OpenAlex ID: W4394376695