Sequences of mitochondrial contigs for A. vaga individuals L1-L11
Year: 2019
Type: dataset
Abstract: Sequences of mitochondrial contigs for A. vaga individuals L1-L11 extracted from whole-genome assemblies using the mitochondrial contig from the first published A. vaga genome assembly (Flot et al., 2013) as the query for blastn search. For L1, mitochondrial contigs were extracted from MiSeq-based L1 diploid assembly (N50=22,073 bp). For individuals L2-L11, highly fragmented assemblies (with N50 in the range 1,600-3,400 bp) were generated from HiSeq reads with SPAdes. Mitochondrial sequences for each individual, L1-L11, are in separate FASTA files.
Source: Figshare
Authors: Vakhrusheva, Olga, Mnatsakanova, Elena A., Galimov, Yan R., Neretina, Tatiana V., Gerasimov, Evgeny S., Naumenko, Sergey A., Ozerova, Svetlana G., Zalevsky, Arthur O., Yushenova, Irina A., Rodriguez, Fernando, Arkhipova, Irina R., Penin, Aleksey, Logacheva, Maria, Bazykin, Georgii A., Kondrashov, Alexey S.
Language: English
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: green
OpenAlex ID: W4394428303