Additional file 9: of Transcriptomic responses of the basidiomycete yeast Sporobolomyces sp. to the mycotoxin patulin
Year: 2016
Type: dataset
Abstract: Combined table of cuffdiff, Blast2GO and BLASTx outputs for Sporobolomyces sp. genes detected only in the presence of 5 μg/ml of PAT. DEGs have been sorted for FPKM expression values (from the highest to the lowest), and those with FPKM lower than 1.5 were discarded. BLASTx results with existing Sporobolomyces sp. genome annotation were useful to identify new genes detected in the present study, while BLASTx against SGD was necessary to identify Sporobolomyces sp. orthologs in yeast and to assign gene names accordingly; low homology (i.e. E-values positive or higher than 1E-3) was reported as NA, indicating that no S. cerevisiae orthologs of Sporobolomyces sp. DEGs were found. (XLSX 13 kb)
Source: Figshare
Language: English
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: green
OpenAlex ID: W4394493277