Work

Oxford Nanopore long read-based shotgun metagenomic data sets of simulated bacterial communities originating from fresh spinach and surface water

Year: 2024

Type: article

Abstract: ABSTRACT Oxford Nanopore long reads of simulated bacterial communities from fresh spinach and surface water were generated (R9.4.1+SQK-LSK109 and R10.4+SQK-LSK112; 0.5, one, and two million reads). Salmonella enterica serotype Heidelberg, Montevideo, or Typhimurium was included alone or in combination in the spinach community, while the water community harbored Pseudomonas aeruginosa .

Source: Microbiology Resource Announcements

DOI: 10.1128/mra.00586-24

Authors: Zhao Chen, Christopher J. Grim, Padmini Ramachandran, Jianghong Meng

Institutions: University of Maryland, College Park, Center for Food Safety and Applied Nutrition, United States Food and Drug Administration

Language: English

Topic: Genomics and Phylogenetic Studies

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: diamond

Funder: U.S. Food and Drug Administration

Award: G1060425092