Work

Rvisdiff: An R package for interactive visualization of differential expression

Year: 2024

Type: article

Abstract: Rvisdiff is an R/Bioconductor package that generates an interactive interface for the interpretation of differential expression results. It creates a local web page that enables the exploration of statistical analysis results through the generation of auto-analytical visualizations. Users can explore the differential expression results and the source expression data interactively in the same view. As input, the package supports the results of popular differential expression packages such as DESeq2, edgeR, and limma. As output, the package generates a local HTML page that can be easily viewed in a web browser. Rvisdiff is freely available at https://bioconductor.org/packages/Rvisdiff/.

Source: Frontiers in Bioinformatics

DOI: 10.3389/fbinf.2024.1349205

Authors: David Barrios, Carlos Prieto

Institution: Universidad de Salamanca

Language: English

Topic: Gene expression and cancer classification

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: gold

Estimated APC paid: $2,125

Funders: Ministerio de Ciencia, Innovación y Universidades, Ministerio de Ciencia e Innovación, European Social Fund