Work

Data on whole genome resequencing of selected Malaysian rice accessions with opposing response to salinity stress

Year: 2024

Type: data-paper

Abstract: L.) is currently limited. It was necessary to conduct genome resequencing of these rice accessions exhibiting different responses to salinity stress. The sequencing was carried out using the Illumina NovaSeq X platform with 30× sequencing coverage to pinpoint variants between salinity tolerant and sensitive rice accessions. The discovery of single nucleotide polymorphisms (SNPs) is crucial for the development of DNA markers associated with salinity tolerance traits. The genome sequence data (FASTQ format) for these accessions have been deposited to the European Nucleotide Archive (ENA) database under the accession number PRJEB71716.

Source: Data in Brief

DOI: 10.1016/j.dib.2024.111051

Authors: Shahril Ab Razak, Rabiatul-Adawiah Zainal-Abidin, Asmuni Mohd Ikmal, Norfarhan Mohd-Assaad, Noraziyah Abd Aziz Shamsudin

Institutions: Malaysian Agricultural Research and Development Institute, National University of Malaysia

Language: English

Topic: Genetic Mapping and Diversity in Plants and Animals

Subfield: Genetics

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

SDG: Zero hunger

Open Access status: gold

Estimated APC paid: $850