Work

Identification of genes associated with zinc and copper concentrations in walnut (Juglans regia L.) by GWAS analysis

Year: 2024

Type: article

Abstract: 154 walnut genotypes from various geographic regions were analyzed in the study. Micronutrient concentrations of zinc (Zn) ranged from 1.61 to 8.98 mg/100 g, and the concentrations of copper (Cu) varied between 0.12 and 0.38 mg/100 g. 16,473 SNPs were generated using Diversity Array Technology (DArT) for genome-wide association (GWAS) studies. The Mixed Linear Model (MLM) utilizing the Q + K model revealed seven associated markers for the element Zn in 2021 and four in 2022. The MLM (Q + K) model indicated two associated markers for the element Cu in 2021 and three in 2022. The markers found in this study were significantly associated with the levels of Zn and Cu in different walnut genotypes. One potential candidate gene for Zn was identified based on sequences showing homology to linked SNP. The markers associated with Zn and Cu can be effectively used in walnut plant breeding programs to assist in selecting Zn and Cu traits.

Source: TURKISH JOURNAL OF BOTANY

DOI: 10.55730/1300-008x.2828

Authors: BERFİN NAZLICAN KAMAN, BÜLENT YAĞMUR, ERDAL ORMAN, MUHAMMED BAHATTİN TANYOLAÇ, DUYGU ATEŞ

Institution: Ege University

Language: English

Topic: Genetic Mapping and Diversity in Plants and Animals

Subfield: Genetics

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

SDG: Zero hunger

Open Access status: diamond

Funder: U.S. National Library of Medicine