Year: 2025
Type: article
Abstract: Cell-free translation systems are indispensable for studying protein synthesis, enabling researchers to explore translational regulation across different cell types. The difficulties in producing cell-free translation systems from different cell types limit the ability to study regulatory mechanisms that depend on different biological contexts. Here, we present a scalable method for preparing translation-competent lysates from a range of frequently used human cell lines using dual centrifugation. We optimized lysis conditions for adherent and suspension cells, producing high-quality lysates from HEK-293 (adherent and in suspension), HeLa, SH-SY5Y, and U2OS cells. Our results demonstrate that cell-specific factors influence translation efficiency, with adherent HeLa cells showing the highest activity. We also observed that sensitivity to lysis conditions varies between cell lines, underscoring the importance of fine-tuning parameters for efficient protein production. Our method provides a robust and adaptable approach for generating cell-type-specific lysates, broadening the application of in vitro translation systems in studying translational mechanisms.
Source: Journal of Biological Chemistry
Institution: University of Bern
Language: English
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: gold
Estimated APC paid: $3,430
Funders: National Science Foundation, University of Bern, Kanton Bern, Ministerul Cercetării, Inovării şi Digitalizării, Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung, UniBern Forschungsstiftung, Fondation Claude et Giuliana, Holcim Stiftung zur Förderung der Wissenschaftlichen Fortbildung, NCCR Catalysis
Awards: G3188738659, Development of a human-based cell-free translation screening to identify SARS-CoV-2 Nsp1 inhibitors, NCCR RNA & disease: Understanding the role of RNA biology in disease mechanisms, Towards understanding mechanism and physiological role of nonsense-mediated mRNA decay (NMD), G8105150848, G8690818240
OpenAlex ID: W4410818245
