Size-dependent temporal decoupling of morphogenesis and transcriptional programs in pseudoembryos
Year: 2025
Type: article
Abstract: Understanding the interplay between cell fate specification and morphogenetic changes remains a challenge in developmental biology. Gastruloids, stem cell models of postimplantation mammalian development, provide a platform to address this question. Here, using quantitative live imaging and transcriptomic profiling, we show that physical parameters, particularly system size, affect morphogenetic timing and outcomes. Larger gastruloids exhibit delayed symmetry breaking, increased multipolarity, and prolonged axial elongation, with morphogenesis driven by size. Despite these variations, transcriptional programs and cell fate composition remain stable across a broad size range, illustrating the scaling of gene expression domains. In particular, extreme sizes show distinct transcriptional modules and shifts in gene expression patterns. Size perturbation experiments rescued the morphogenetic and pattern phenotypes observed in extreme sizes, demonstrating the adaptability of gastruloids to their effective system size. These findings position gastruloids as versatile models for dissecting spatiotemporal coordination in mammalian development and reveal how physical constraints can decouple gene expression programs from morphogenetic progression.
Source: Science Advances
Authors: Isma Bennabi, Pauline Hansen, Melody Merle, Judith Pineau, Lucille Lopez-Delisle, Dominique Kolly, Denis Duboule, Alexandre Mayran, Thomas Gregor
Language: English
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: gold
Estimated APC paid: $4,500
Awards: G1888358488, Transcriptional Regulation of Cyp26a1 during axial extension in mammalian gastruloids, Expanding the toolbox of stem cell derived models of embryos, Gene regulation and function during axial extension in vivo and in vitro, Chromatin dynamics and transcription in mitotic mESCs, G8690818240
OpenAlex ID: W4413418958
