ERGA-BGE genome of Stigmatoteuthis arcturi Robson, 1948: the jewelled squid
Year: 2025
Type: article
Abstract: reference genome offers a valuable resource for understanding the evolutionary patterns of oceanic squids, who perform important ecological roles as both predators and prey in mesopelagic and deep-sea environments, while their genomes remain understudied. The entirety of the genome sequence was assembled into 46 contiguous chromosomal pseudomolecules. This chromosome-level assembly encompasses 3.25 Gb, composed of 1,268 contigs and 497 scaffolds, with contig and scaffold N50 values of 11.0 Mb and 74.6 Mb, respectively.
Source: Open Research Europe
Authors: Fernando Ángel Fernández-Álvarez, Ainhoa Bernal-Bajo, Nuria Escudero, María Conejero, Ana Riesgo, Rosa Fernández, Rita Monteiro, Astrid Böhne, Laura Aguilera, Marta Gut, Tyler S Alioto, Francisco Câmara Ferreira, Fernando Cruz, Jèssica Gómez-Garrido, Leanne Haggerty, Fergal Martin, Tom Brown
Institutions: Consejo Superior de Investigaciones Científicas, Instituto Español de Oceanografía, Institut de Ciències del Mar, Centro Oceanográfico de Gijón, Universitat Pompeu Fabra, Institut de Biologia Evolutiva, Museo Nacional de Ciencias Naturales, Leibniz Institute for the Analysis of Biodiversity Change, Centro Nacional de Análisis Genómico, Universitat de Barcelona, European Bioinformatics Institute, Berlin Center for Genomics in Biodiversity Research, Leibniz Institute for Zoo and Wildlife Research
Language: English
Domain: Life Sciences
Open Access status: gold
Estimated APC paid: $841
Funders: UK Research and Innovation, Ministerio de Ciencia, Innovación y Universidades, European Commission, Bundesministerium für Bildung und Forschung, Albert-Ludwigs-Universität Freiburg, Generalitat de Catalunya, German Network for Bioinformatics Infrastructure, HORIZON EUROPE Framework Programme, Staatssekretariat für Bildung, Forschung und Innovation, Agencia Estatal de Investigación
Awards: G10638306, Biodiversity Genomics Europe, G1105844351, G1175115578, G1657491039, G1668213895, G1669370597, G1675333016, G2064873908, G210041235, G2262748287, G2321540416, G24526761, G2601397997, G3005324705, G300979063, G34346518, G3480869486, G3681454997, G4042783231, G4246510624, G425668148, G4372569377, G4819003013, G4916449633, G5080475149, G5635532810, de.NBI - Etablierungsphase - Leistungszentrum: RBC - RNA Bioinformatic, G6084467093, G624877701, G6731524417, G6861619220, Biodiversity Genomics Europe, G721079420, G7805626310, G7863371703, G8181105605, G8186121639, Biodiversity Genomics Europe, G8330680683, G8456977996, G8497050386, G8793232926
OpenAlex ID: W4413993109