Introducing WARP: A collection of cloud-optimized workflows for biological data processing and reproducible analysis
Year: 2021
Type: other
Abstract: The Broad Institute Data Sciences Platform has recently released WDL Analysis Research Pipelines (WARP), a brand new, public GitHub repository of cloud-optimized WDL workflows that are used in production at the Broad Institute and in large collaborative efforts such as gnomAD , All of Us , the Human Cell Atlas , and the BRAIN Initiative . In WARP, we are deeply committed to scientific reproducibility, provenance, and transparency, so every workflow is released in GitHub with a semantic version number and release notes. They are all open-source under a BSD 3-Clause license , and they call only open-source tools published in public dockers. We’ve registered each of the workflows in Dockstore so they can be easily imported into Terra , a scalable cloud platform supporting biomedical research. Our hope is the release of WARP will lead to a community around the use, improvement, and contribution of production quality bioinformatics cloud pipelines. Learn more at https://broadinstitute.github.io/warp/ .
Institution: Broad Institute
Language: English
Subfield: Information Systems and Management
Field: Decision Sciences
Domain: Social Sciences
Open Access status: gold
OpenAlex ID: W4416509587
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