Work

Management of clinical, biological and simulated data for uniform simulation workflows

Year: 2024

Type: article

Abstract: Simulation workflows imitate and generate data for analysis of biological systems usingcomputer models and are created through the integration of various computationaltools and techniques. For Intervertebral disc degeneration (IVD), we identified theMolgenis database as our project-specific database, Molgenis EMX Catalogue as ourdata catalogue, XNAT medical imaging platform, OpenStack as our cloud platformproviding both file and object storage and OpenVRE as our workflow authoring tool.

Source: Zenodo (CERN European Organization for Nuclear Research)

DOI: 10.5281/zenodo.10558669

Author: Chemorion, Francis

Institution: Universitat Pompeu Fabra

Language: English

Topic: Scientific Computing and Data Management

Subfield: Information Systems and Management

Field: Decision Sciences

Domain: Social Sciences

Open Access status: green

Funder: European Commission

Award: Training network to advance integrated computational simulations in translational medicine, applied to intervertebral disc degeneration