Work

Non-consensus flanking sequence of hundreds of base pairs around in vivo binding sites: statistical beacons for transcription factor scanning

Year: 2025

Type: article

Abstract: Workflow description, complete results and additional visualization for the publication Non-consensus flanking sequence of hundreds of base pairs around in vivo binding sites: statistical beacons for transcription factor scanning. In source_codes.zip, the scripts used to perform the analysis are stored. In excessive_patches_information.zip, the final results of the analysis can be found in a self-explanatory CSV file. The chosen_bed_files__thresholded.csv contains information on the ChIP-seq experiments used during the analysis.

Source: Zenodo (CERN European Organization for Nuclear Research)

DOI: 10.5281/zenodo.15472406

Author: Faltejsková, Kateřina

Institutions: Czech Academy of Sciences, Charles University, Czech Academy of Sciences, Institute of Organic Chemistry and Biochemistry

Language: English

Topic: Genomics and Chromatin Dynamics

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: green

OpenAlex ID: W6893377839

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