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Genotype differentiation of highly pathogenic avian influenza viruses (HPAIV) of the goose/Guangdong lineage in Germany - Derivation and deployment of reference sequences

Year: 2023

Type: article

Abstract: Highly pathogenic avian influenza viruses (HPAIV) of the H5 goose/Guangdong (gs/GD) lineage have repeatedly emerged in Germany since 2006. Rooted in the respective gs/GD lineages, HPAIV in Germany have genetically diversified into a plethora of clades and subclades and evolved into an assortment of sub- and genotypes. This technical note summarizes the genotype differentiation procedure, lists the successfully assigned genotypes and supplies corresponding reference sequences.

Source: Zenodo (CERN European Organization for Nuclear Research)

DOI: 10.5281/zenodo.8233814

Authors: Pohlmann, Anne, Harder, Timm

Institution: Friedrich-Loeffler-Institut

Language: English

Topic: Influenza Virus Research Studies

Subfield: Epidemiology

Field: Medicine

Domain: Health Sciences

Open Access status: green

OpenAlex ID: W6931896451

FWCI: 0.5

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Cited by: 3

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