Reconstruction of Diploid High-Order 3D Genome Interactions from Long Noisy Concatemers
Year: 2025
Type: article
Abstract: The files "IQSEC2_DLR_reads.txt", "IQSEC2_ME_reads.txt", "IQSEC2_bar_data.txt", "RBM3_DLR_reads.txt", "RBM3_ME_reads.txt", and "RBM3_bar_data.txt" contain the data for Figure 7: Haplotype-specific high-order reads plot.The .mcool files contain diploid contact matrices can be visualized via HiGlass.Diploid contact matrices used for depicting contact heatmaps (Figures 4B, 5C-G, and 6G; Extended Data Figures 2A,B, 4A-C, 5A-E, and 6), including both Hi-C(paternal.mcool, maternal.mcool) and Pore-C(PoreC_paternal.ds.mcool, PoreC_maternal.ds.mcool) derived matrices
Author: Zhongshan Ophthalmic Center, Sun Yat-sen University
Institution: Zhongshan Ophthalmic Center, Sun Yat-sen University
Language: English
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: green
OpenAlex ID: W6949278169