eDNAqua-Plan Deliverable 7: Report on eDNA data repositories
Year: 2024
Type: article
Abstract: This report contains an inventory of the ongoing and completed environmental DNA (eDNA)initiatives and repositories, identifying their geographical, ecological and taxonomiccoverages. It includes a brief description of the methodologies used to perform theinventorying.The inventory was sought in three different ways: Manual review of 29 resources (eDNA and reference libraries) by the bioinformaticsteam for 40 properties. A questionnaire sent out to eDNA research teams, for which(60) responses wereneatly collated. Automated(LLM) mining of scientific papers This inventory allowed us to obtain a good overview of the current initiatives and databasesbeing used for eDNA data sharing and publication and to identify the main gaps and areasfor improvement.
Authors: Woollard, Peter, Kavakiotis, Ioannis, Krawczyk, Dawid, Moutinho, Jorge, Seweryński, Michał, Boulanger, Emilie, Babo, Camila, Martins, Filipa, Paupério, Joana, Costa, Filipe, Derycke, Sofie, Egge, Elianne, Grabowski, Michal, Papakostas, Spiros
Institutions: European Bioinformatics Institute, Centro de Biologia Molecular e Ambiental, University of Łódź, Centro de Investigação em Biodiversidade e Recursos Genéticos, Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, University of Minho, Instituut voor Landbouw en Visserijonderzoek, Norwegian Institute for Water Research
Language: English
Subfield: Ecology
Field: Environmental Science
Domain: Physical Sciences
Open Access status: green
Funder: European Commission
OpenAlex ID: W6949448432
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