Work

Percentile-Based Outbreak Thresholding for Machine Learning-Driven Pest Forecasting in Rice (Oryza sativa L.) Farming: A Case Study on Rice Black Bug (Scotinophara coarctata F.) and the White Stemborer (Scirpophaga innotata W.)

Year: 2025

Type: article

Abstract: Rice (Oryza sativa L.) production in the Philippines remains highly vulnerable to recurrent outbreaks of the Rice Black Bug (RBB; Scotinophara coarctata F.) and White Stemborer (WSB; Scirpophaga innotata W.), two of the most destructive pests in Southeast Asian rice ecosystems. Classical economic threshold levels (ETLs) are difficult to estimate in smallholder settings due to the lack of cost–loss data, often leading to either delayed or excessive pesticide application. To address this, the present study developed an adaptive outbreak-forecasting framework that integrates the Number–Size (N–S) fractal model with machine learning (ML) classifiers to define and predict pest regime transitions. Seven years (2018–2024) of light-trap surveillance data from the Philippine Rice Research Institute–Midsayap Experimental Station were combined with daily climate variables from the NASA POWER database, including air temperature, humidity, precipitation, wind, soil moisture, and lunar phase. The N–S fractal model identified natural breakpoints in the log–log cumulative frequency of pest counts, yielding early-warning and severe-outbreak thresholds of 134 and 250 individuals for WSB and 575 and 11,383 individuals for RBB, respectively. Eight ML algorithms such as Logistic Regression, Decision Tree, Random Forest, Support Vector Machine, Balanced Bagging, LightGBM, XGBoost, and CatBoost were trained on variance-inflation-filtered climatic and temporal predictors. Among these, CatBoost achieved the highest predictive performance for WSB at the 94.3rd percentile (accuracy = 0.932, F1 = 0.545, ROC–AUC = 0.957), while Logistic Regression performed best for RBB at the 75.1st percentile (F1 = 0.520, ROC–AUC = 0.716). SHAP (SHapley Additive exPlanations) analysis revealed that outbreak probability increases under warm nighttime temperatures, high surface soil moisture, moderate humidity, and calm wind conditions, with lunar phase exerting additional modulation of nocturnal pest activity. The integrated fractal–ML approach thus provides a statistically defensible and ecologically interpretable basis for adaptive pest surveillance. It offers an early-warning system that supports data-driven integrated pest management (IPM), reduces unnecessary pesticide use, and strengthens climate resilience in Philippine rice ecosystems.

Source: Sustainability

DOI: 10.3390/su18010182

Authors: Gina D. Balleras, Sailila E. Abdula, Cristine G. Flores, Reymark D. Deleña

Institutions: Philippine Rice Research Institute, Department of Agriculture

Language: English

Topic: Insect-Plant Interactions and Control

Subfield: Insect Science

Field: Agricultural and Biological Sciences

Domain: Life Sciences

SDG: Zero hunger

Open Access status: gold

Estimated APC paid: $2,896