nf-osi/nf-metadata-dictionary: Release v10.2.1
Year: 2023
Type: software
Abstract: Features Added spatial transcriptomics support with separate imaging and sequencing templates Expanded vocabulary for NF-associated tumor types, body parts, and specimen types Added shRNA-seq (EFO:0030034) to sequencing assays Added Leica DMI 6000B microscopy platform Made organ conditional on specimenType for organism substances Renamed 'Private Access' to 'Private' in accessType vocabulary Added GenericDataResourceTemplate and --replace mode to curation task workflow Constrained model* attributes to PdxGenomicsAssayTemplate Fixed ScRNASeqTemplate missing fileFormat values Breaking Changes None Bug Fixes Corrected Pheochromocytoma ontology ID (NCIT:C3326) Fixed workflow file and documentation updates
Authors: Anh Nguyet Vu, Robert Allaway, nfosi-service, Christina Parry, james.moon, Belinda B. Garana, Jineta Banerjee, aditya-nath-sage, Sasha Scott, alevichev, allaway-test
Institution: Sage Bionetworks
Language: English
Subfield: Information Systems
Field: Computer Science
Domain: Physical Sciences
Open Access status: green
OpenAlex ID: W6950168234