Additional file 1: of GRASPx: efficient homolog-search of short peptide metagenome database through simultaneous alignment and assembly
Year: 2016
Type: article
Abstract: Algorithm for constructing extension links and BLASTP alignments between selected P. acnes proteins and their predicted homologous contigs. The file contains detailed algorithm and pseudo-code for linear construction of extension links. The file also contains NCBI BLASTP alignments of two P. acnes proteins, whose homologous reads were not identified by PSI-BLAST from DS2 but were identified by GRASPx. (PDF 813 kb)
Source: Figshare
Authors: Zhong, Cuncong, Yang, Youngik, Yooseph, Shibu
Language: English
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: green
OpenAlex ID: W7136290126