Additional file 1: Figure S1. of DAPPER: a data-mining resource for protein-protein interactions
Year: 2015
Type: article
Abstract: An overview of DAPPER retrieval tools. Venn diagram highlighting sections of records which will be retrieved by various tools, when applied to three hypothetical experiments. Each of the three tools can retrieve data in either tab-delimited or HTML format (see DAPPER Results web page for these options). Figure S2. Home page of DAPPER. The search field can be used to retrieve all experiments containing a particular CGID of Drosophila melanogaster. Browse button (MartView link) navigates to DAPPER BioMart interface for custom querying. By default, results are sorted (descending) by “Protein score”. Upload link is currently restricted to DAPPER curators and collaborators only. Figure S3. Stepwise guide to retrieve all proteins and their ontological annotations for a given experiment. The guide also shows how data from an external resource (Ensembl) can be retrieved and seamlessly integrated with DAPPER contents. Figure S4. Stepwise guide to retrieve kinetochore associated Drosophila genes. Gene ontology filter (GO Term Name) is set to “kinetochore” through linking with Ensembl database. Entries retrieved are further sorted by “Protein score” using SORT tool (SORT_HTML) on the Results page. Figure S5. Stepwise guide to compare two (or more) experiments. The results will contain only those hits which are common between the experiments selected for comparison (BubR1 and Polo kinase). Experiments having an entry in common are grouped together for better interpretation of results. (PDF 2334 kb)
Source: Figshare
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: green
OpenAlex ID: W7138026396
FWCI:
Cites:
Cited by:
Related to: