Multi-site validation of an AI-based biomarker test for determining ER, PR, and HER2 status from H&E-stained breast cancer slides
Year: 2026
Type: article
Abstract: Background: hybridisation (ISH) are widely used, but they are resource-intensive and time-consuming. To address these challenges, we developed PANProfiler Breast (PPB), an artificial intelligence (AI)-based digital test to analyse images of haematoxylin-eosin (H&E)-stained slides for BC biomarker assessment. Materials and methods: PPB was validated on a large, diverse cohort of 3138 unique BC samples from five sites across the UK and United States. The validation included both biopsy and resection specimens, digitally scanned using multiple imaging platforms. Standard performance characteristics were assessed by comparison with IHC and ISH reference assays. Results: PPB consistently demonstrated high performance across multiple cohorts, confirming its effectiveness for establishing the status of ER/PR and assessing HER2 negativity for BC patients. HER2 achieved an average sensitivity of 90.6% (±0.6) and a concordance of 93.7% (±7.8%) when determining the negative status. For ER, we measured an overall sensitivity and specificity of 98.2% (±0.3%) and 62.0% (±7.3%), averaged over all sites, respectively. For PR the averaged sensitivity and specificity across all sites were 97.9% (±1.0%) and 45.7% (±1.6%), respectively. Conclusions: Integrating PPB into routine clinical workflows could enable rapid and accurate assessment of BC biomarkers, improving access to targeted therapies and enhancing clinical decision making.
Institutions: University of St Andrews, Queen Mary University of London, Barts Cancer Institute, NHS Lothian, Western General Hospital, Sheffield Teaching Hospitals NHS Foundation Trust, NHS Greater Glasgow and Clyde, University of Sheffield, Cardiff University, University Hospital Heidelberg, National Center for Tumor Diseases, University Hospital Carl Gustav Carus, Else Kröner Fresenius Center for Digital Health, Technische Universität Dresden
Language: English
Topic: AI in cancer detection
Subfield: Artificial Intelligence
Field: Computer Science
Domain: Physical Sciences
Open Access status: gold
Estimated APC paid: $3,170
OpenAlex ID: W7154249439
