Data for Helicity of a confined bottlebrush ring polymer
Year: 2026
Type: dataset
Abstract: The data archived here includes all results from the post-processing analysis of molecular dynamics simulations referenced in the attached paper titled "Helicity of a con ned bottlebrush ring polymer". This dataset offers a reusable computational framework and data resource for exploring the global helicity of the self-assembled bacteria chromosome in cells, resulted by the confinement of cell and the packing of nucleoid. We have conducted coarse-grained molecular dynamics simulations using open-source software LAMMPS (https://www.lammps.org/#gsc.tab=0). "Simulation.zip" contains the example raw data, parameters used in this work, and the scripts for running simulations. "Analysis.zip" contains scripts used for extracting trajectories from raw simulation data can calculate the ensemble-averaged results. "DataOfFigures.zip" contains data of all figures in the maintext and SI, except for the contact maps.
DOI: 10.13020/td88-9c02
Authors: Dorfman, Kevin, Li, Luyang, Adhikari, Sabin
Institution: University of Minnesota
Language: English
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: green
OpenAlex ID: W7165790741