Work

Code for Spatially resolved multimodal hallmarks of response to neoadjuvant immunotherapies in the melanoma ecosystem in 2D and 3D

Year: 2026

Type: software

Abstract: Code used for processing and analyses. MERFISH_BAYSOR contains original scripts and notebooks related to MERFISH data. MIF contains contains original scripts and notebooks related to mIF data. STQ contains original config files related to UNI feature extraction wiht STQ. UDTransNet contains original scripts adopting the UDTransNet architecture. UNI contains original scripts for training the UNI-based TLS classifier. LIB contains in-house and downloaded libraries used in the project; standard libraries not included.

Source: Zenodo (CERN European Organization for Nuclear Research)

DOI: 10.5281/zenodo.22066605

Authors: Liu, Zichao, Chuang, Jeffrey, Chen, Pei-Ling

Institutions: Jackson Laboratory, Moffitt Cancer Center

Language: English

Topic: Cancer Immunotherapy and Biomarkers

Subfield: Oncology

Field: Medicine

Domain: Health Sciences

Open Access status: green

OpenAlex ID: W7204585950

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