Genomic Epidemiology of Canine Distemper Virus (CDV) in Neotropical Primates in Brazil Reveals Multiple Spillover Events and Convergent Evolution at Hemagglutinin Residue 519
Year: 2026
Type: preprint
Abstract: Canine distemper virus (CDV; Morbillivirus canis ) is a multi-host paramyxovirus primarily maintained in the order Carnivora. However, recent outbreaks in Neotropical primates suggest recurrent cross-species spillover into non-human primates. Between May and July 2022, seven marmosets ( Callithrix penicillata ) were found dead in urban and peri-urban areas of Montes Claros, Minas Gerais, Brazil. Viral metagenomic sequencing recovered two near complete CDV genomes directly from liver samples. Maximum likelihood and Bayesian phylogenetic analyses placed these genomes within the South American CDV lineage and supported at least three independent zoonotic introductions into Callithrix populations. Domestic dogs ( Canis lupus familiaris ) were inferred as the most likely source and the crab-eating fox ( Cerdocyon thous ) as a probable bridge host. Ancestral-state reconstruction identified a substitution at position 519 of the hemagglutinin (H) protein (R519I in the two primate clades and R519G in a singleton primate sequence). In silico modelling of the marmoset signaling lymphocytic activation molecule (SLAM) complex was consistent with a modest reorganisation of the receptor-binding head in the 519-substituted variants (ipTM = 0.82), generating a testable hypothesis that this residue may contribute to adaptation at the primate SLAM receptor interface and is associated with altered predicted docking orientation for the receptor. Together, these findings suggest that residue 519 is a candidate marker of CDV adaptation to Neotropical primates and emphasise the importance of integrating genomic surveillance with domestic dog vaccination efforts under a One Health framework to reduce the threat of CDV spillover to vulnerable wildlife populations.
Authors: Mayara Bertanhe, Milena G. Cabral, Ian N. Valença, Camila L. Nacif, Ingra M. Claro, Lucas A. Diniz, Maiara M. M. Valeriano, Lívia A. Gomes, Diogo H. M. Costa, Ramon S. Oliveira, Maria E. Gonçalves-dos-Santos, Esmenia C. Rocha, Bianca C. Silva, Franciane M. de Oliveira, Lucas A. M. Franco, Filipe V. S. de Abreu, Thallyta M. Vieira, Ester C. Sabino, Nuno R. Faria, Filipe R. R. Moreira
Language: English
Topic: Virology and Viral Diseases
Subfield: Epidemiology
Field: Medicine
Domain: Health Sciences
Open Access status: green
Awards: G4772350538, G4786692387, AVALIAÇÃO DA TRANSMISSÃO DA DOENÇA DE CHAGAS NO NORTE DE MINAS GERAIS SOB UMA PERSPECTIVA DE SAÚDE ÚNICA, Dengue and Zika Immunology and Genomics Multi-Country Network (DeZi Network), Brazil-UK Centre for Arbovirus Discovery, Diagnosis, Genomics and Epidemiology (CADDE), ARBOVERSE, a data-driven platform and disease modeling to anticipating and mitigating arbovirus emergence, VIGILÂNCIA ECOEPIDEMIOLÓGICA NA PREDIÇÃO DO RISCO PARA OCORRÊNCIA DA LEISHMANIOSE TEGUMENTAR E DOENÇA DE CHAGAS NO NORTE DE MINAS GERAIS NA PERSPECTIVA DE SAÚDE ÚNICA, G8976542914
OpenAlex ID: W7208788821