Year: 2026
Type: article
Abstract: ABSTRACT Biomolecular condensates have so far been studied in terms of their structural, compositional, and functional properties. However, condensate enzymatic activity —a key aspect of cellular metabolism— remains unexplored due to the complexity of the system. In this study, using a combination of experimental, computational and theoretical techniques, we have discovered that the non-equilibrium activity which originates from catalytic reactions couples with the environment through various feedback mechanisms across five orders of magnitude of length scales. We observe that condensed enzymes catalyse more rapidly in the presence of crowding proteins and show that the increased enzymatic activity within these droplets stems from the emergence of lower-energy protein conformations induced by the highly crowded environment. Despite the crowding in the environment of the droplet, which might suggest an effective increase in its overall viscosity, we find that it becomes more agile, as evidenced by the observation of enhanced diffusion and macroscopic flow, due to the enzymatic activity. These findings shed new light on the dynamic interplay between enzymatic activity, composition and crowding in condensates, and their roles on the mobility and accessibility of various functional units in these environments, offering a novel perspective on liquidliquid phase separation in metabolically active conditions.
Source: Nature Communications
Institutions: Okinawa Institute of Science and Technology Graduate University, University of Perugia, Max Planck Institute for Dynamics and Self-Organization, RIKEN, Wenzhou Institute, University of Chinese Academy of Sciences, University of Cambridge, University of Tsukuba, RIKEN Center for Computational Science, The University of Tokyo, University of Oxford, Institute for Protein Research, The University of Osaka, The University of Osaka
Language: English
Topic: RNA Research and Splicing
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: gold
Estimated APC paid: $6,990
Funders: Ministry of Education, Culture, Sports, Science and Technology, Bundesministerium für Bildung und Forschung, Cabinet Office, Government of Japan, Max-Planck-Gesellschaft, Okinawa Institute of Science and Technology Graduate University, Engineering and Physical Sciences Research Council, Japan Society for the Promotion of Science, RIKEN
Awards: G1527142388, G2719384493, G2979953628, G2991958618, G3284905134, Study of enzymes inside liquid-liquid phase separated crowded droplets, G4502442016, 高速QM/MM自由エネルギー計算法の開発と新規蛍光プローブの分子設計, G5176219108, Unraveling enzyme functions in liquid -liquid phase separation droplets, G532248676, Nucleation and Extinction in Nonequilibrium Statistical Field Theories, G7122904584, Multi-scale molecular dynamics simulation on biomolecular dynamics in crowded cellular environments
OpenAlex ID: W4406926255
