Work

An Overview of the CRAFT Concept Annotation Guidelines.

Year: 2010

Type: conference-paper

Abstract: We present our concept-annotation guidelines for an large multi-institutional effort to create a gold-standard manually annotated corpus of full-text biomedical journal articles. We are semantically annotating these documents with the full term sets of eight large biomedical ontologies and controlled terminologies ranging from approximately 1,000 to millions of terms, and, using these guidelines, we have been able to perform this extremely challenging task with a high degree of interannotator agreement. The guidelines have been designed to be able to be used with any terminology employed to semantically annotate concept mentions in text and are available for external use.

Source: PubMed

Authors: Michael Bada, Lawrence E Hunter, Miriam Eckert, Martha Palmer

Institutions: University of Colorado Anschutz, University of Colorado Denver, University of Colorado Boulder

Language: English

Topic: Biomedical Text Mining and Ontologies

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: green

Funders: National Institutes of Health, U.S. National Library of Medicine

Awards: Construction of a Full Text Corpus for Biomedical Text Mining, Colorado Biomedical Informatics Training Program

OpenAlex ID: W819451571