Comparison of automatically extracted text-based annotation and manual annotation of the gene regions
Year: 2011
Type: other
Abstract: The region. The region. The 'evaluation' track refers to text-based hits extracted from papers with curated regulatory data in ORegAnno; the 'prediction' track refers to text hits extracted from papers not currently curated in ORegAnno, but with high predicted -regulatory content. Annotations in both text-based tracks are labeled with their corresponding PMIDs. Also shown are the original manual annotation in the FlyReg database, the automated mapping of these curated data in ORegAnno, and FlyBase genes, including the noncoding RNA gene that is expressed in response to heat shock. Differences in the FlyReg and ORegAnno mappings in (a) arise because the sequences for these regions are duplicated in the genome and alternative unique mappings are chosen in the two databases.Copyright information:Taken from "Text-mining assisted regulatory annotation"http://genomebiology.com/2008/9/2/R31Genome Biology 2008;9(2):R31-R31.Published online 13 Feb 2008PMCID:PMC2374703.
Source: Figshare
Authors: Aerts, Stein, Haeussler, Maximilian, Vooren, Steven Van, Obi L Griffith, Hulpiau, Paco, Jones, Steven JM, Montgomery, Stephen B, Bergman, Casey M
Language: English
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: green
OpenAlex ID: W6958417105