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Amutha Ramaswamy

Observed names: A. Ramaswamy, R Amutha, R. Amutha, Ramaswamy Amutha
ORCID: 0000-0002-4677-2263
Observed ORCID: 0000-0002-4677-2263
OpenAlex ID: A5044076845
Bader's and Reactivity Descriptors' Analysis of DNA Base Pairs
2004 · R. Parthasarathi, R. Amutha, et al. · The Journal of Physical Chemistry A · 78
Helical Structure of Xylose-DNA
2009 · Amutha Ramaswamy, Mathy Froeyen, et al. · Journal of the American Chemical Society · 53
The proteinopathy of D169G and K263E mutants at the RNA Recognition Motif (RRM) domain of tar DNA-binding protein (tdp43) causing neurological disorders: A computational study
2017 · Vishwambhar Vishnu Bhandare, Amutha Ramaswamy · Journal of Biomolecular Structure and Dynamics · 45
Structural dynamics of nucleosome core particle: Comparison with nucleosomes containing histone variants
2004 · Amutha Ramaswamy, Ivet Bahar, et al. · Proteins Structure Function and Bioinformatics · 36
Structural Dynamics of Human Argonaute2 and Its Interaction with siRNAs Designed to Target Mutant tdp43
2016 · Vishwambhar Bhandare, Amutha Ramaswamy · Advances in Bioinformatics · 34
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Solution Structure and Conformational Dynamics of Deoxyxylonucleic Acids (dXNA): An Orthogonal Nucleic Acid Candidate
2011 · Mohitosh Maiti, Vanessa Siegmund, et al. · Chemistry - A European Journal · 25
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Ligand-based pharmacophore modeling and QSAR approach to identify potential dengue protease inhibitors
2023 · Anushka A. Poola, Prithvi S. Prabhu, et al. · Frontiers in Molecular Biosciences · 22
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Molecular dynamics of interaction of Sesamin and related compounds with the cancer marker β-catenin: an in silico study
2018 · Bindu Madhuri Cavuturu, Vishwambar Vishnu Bhandare, et al. · Journal of Biomolecular Structure and Dynamics · 20
Virtual screening, molecular dynamics simulations, and in vitro validation of EGFR inhibitors as breast cancer therapeutics
2024 · Swathi R. Shetty, Sudhan Debnath, et al. · Bioorganic Chemistry · 18
Structural dynamics of nucleosome mediated by acetylations at H3K56 and H3K115,122
2016 · Muthukumaran Rajagopalan, Sangeetha Balasubramanian, et al. · European Biophysics Journal · 18
Interaction of benzidine with DNA: experimental and modelling studies
2001 · R. Amutha, V. Subramanian, et al. · Chemical Physics Letters · 18
Dynamics of Modeled Oligonucleosomes and the Role of Histone Variant Proteins in Nucleosome Organization
2013 · Amutha Ramaswamy, Ilya Ioshikhes · Advances in protein chemistry and structural biology · 16
Pharmacophore based 3D-QSAR modeling and free energy analysis of VEGFR-2 inhibitors
2012 · Muthukumaran Rajagopalan, Sangeetha Balasubramanian, et al. · Journal of Enzyme Inhibition and Medicinal Chemistry · 15
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A bioinformatics approach to the identification of novel deleterious mutations of human TPMT through validated screening and molecular dynamics
2022 · Sidharth Saxena, T. P. Krishna Murthy, et al. · Scientific Reports · 13
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Identification of inhibitor against H. pylori HtrA protease using structure-based virtual screening and molecular dynamics simulations approaches
2018 · Nivedita Rai, R. Muthukumaran, et al. · Microbial Pathogenesis · 12
Ab initio potential energy surface of the Ne…CO complex
1999 · V. Subramanian, K. Chitra, et al. · Chemical Physics Letters · 12
Molecular Dynamics of Double Stranded Xylo-Nucleic Acid
2017 · Amutha Ramaswamy, Daryna Smyrnova, et al. · Journal of Chemical Theory and Computation · 11
Designing a multi-epitope vaccine candidate against pandemic influenza a virus: an immunoinformatics and structural vaccinology approach
2025 · Mahesh Samantaray, Shilpa Sri Pushan, et al. · Molecular Diversity · 10
Insights into the RNA binding mechanism of human L1-ORF1p: a molecular dynamics study
2017 · Muthukumaran Rajagopalan, Sangeetha Balasubramanian, et al. · Molecular BioSystems · 9
Identification of possible siRNA molecules for TDP43 mutants causing amyotrophic lateral sclerosis: In silico design and molecular dynamics study
2016 · Vishwambhar Vishnu Bhandare, Amutha Ramaswamy · Computational Biology and Chemistry · 9
Pharmacophore modelling and electronic feature analysis of hydroxamic acid derivatives, the HIV integrase inhibitors
2013 · B. Sangeetha, R. Muthukumaran, et al. · SAR and QSAR in environmental research · 9
Free energy calculation for DNA bases in various solvents using Flory–Huggins theory
2001 · R Amutha, V Subramanian, et al. · Chemical Physics Letters · 9
Conformational analysis on the wild type and mutated forms of human ORF1p: a molecular dynamics study
2015 · Rajagopalan Muthukumaran, Balasubramanian Sangeetha, et al. · Molecular BioSystems · 8
Structural dynamics of full-length retroviral integrase: a molecular dynamics analysis
2012 · Sangeetha Balasubramanian, Muthukumaran Rajagopalan, et al. · Journal of Biomolecular Structure and Dynamics · 8
Structure-based virtual screening of natural compounds against wild and mutant (R1155K, A1156T and D1168A) NS3-4A protease of Hepatitis C virus
2023 · Mahesh Samantaray, Ramya Pattabiraman, et al. · Journal of Biomolecular Structure and Dynamics · 7
Works count: 49
Citation count: 594
H-index: 13
I10-index: 18
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