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Chaitanya Rastogi
Observed names:
C. Rastogi,
Rastogi, Chaitanya
Institution:
Columbia University
Observed institutions:
University of Southern California,
Columbia University Irving Medical Center,
USC Norris Comprehensive Cancer Center,
Columbia University,
Indian Institute of Technology Kanpur
ORCID:
0000-0001-9155-9341
Observed ORCID:
0000-0001-9155-9341
OpenAlex ID:
A5046567376
Low-Affinity Binding Sites and the Transcription Factor Specificity Paradox in Eukaryotes
2019
·
Judith F. Kribelbauer
, Chaitanya Rastogi
, et al.
·
Annual Review of Cell and Developmental Biology
·
216
PDF
Evolving insights on how cytosine methylation affects protein-DNA binding
2014
·
A. C. Dantas Machado
, T. Zhou
, et al.
·
Briefings in Functional Genomics
·
123
PDF
Prediction of protein–ligand binding affinity from sequencing data with interpretable machine learning
2022
·
H. Tomas Rube
, Chaitanya Rastogi
, et al.
·
Nature Biotechnology
·
119
PDF
Accurate and sensitive quantification of protein-DNA binding affinity
2018
·
Chaitanya Rastogi
, H. Tomas Rube
, et al.
·
Proceedings of the National Academy of Sciences
·
114
PDF
SELEX-seq: A Method for Characterizing the Complete Repertoire of Binding Site Preferences for Transcription Factor Complexes
2014
·
Todd R. Riley
, Matthew Slattery
, et al.
·
Methods in molecular biology
·
84
Timekeeping with electron spin states in diamond
2013
·
J. S. Hodges
, N. Y. Yao
, et al.
·
Physical Review A
·
74
PDF
SelexGLM differentiates androgen and glucocorticoid receptor DNA-binding preference over an extended binding site
2017
·
Liyang Zhang
, Gabriella D. Martini
, et al.
·
Genome Research
·
37
PDF
Dewetting of the Thin Liquid Bilayers on Topographically Patterned Substrates: Formation of Microchannel and Microdot Arrays
2008
·
Dipankar Bandyopadhyay
, Ashutosh Sharma
, et al.
·
Langmuir
·
37
A unified approach for quantifying and interpreting DNA shape readout by transcription factors
2018
·
H Tomas Rube
, Chaitanya Rastogi
, et al.
·
Molecular Systems Biology
·
36
PDF
Context-Dependent Gene Regulation by Homeodomain Transcription Factor Complexes Revealed by Shape-Readout Deficient Proteins
2020
·
Judith F. Kribelbauer
, Ryan E. Loker
, et al.
·
Molecular Cell
·
35
PDF
In vivo Hox binding specificity revealed by systematic changes to a single cis regulatory module
2019
·
Carlos Sánchez-Higueras
, Chaitanya Rastogi
, et al.
·
Nature Communications
·
35
PDF
Transcription factor paralogs orchestrate alternative gene regulatory networks by context-dependent cooperation with multiple cofactors
2022
·
Siqian Feng
, Chaitanya Rastogi
, et al.
·
Nature Communications
·
32
PDF
22 Evolving insights on how cytosine methylation affects protein-DNA binding
2015
·
Satyanarayan Rao
, Ana Carolina Dantas Machado
, et al.
·
Journal of Biomolecular Structure and Dynamics
·
21
PDF
Optimized reporters for multiplexed detection of transcription factor activity
2024
·
Max Trauernicht
, Teodora Filipovska
, et al.
·
Cell Systems
·
9
Optimisation of TP53 reporters by systematic dissection of synthetic TP53 response elements
2023
·
Max Trauernicht
, Chaitanya Rastogi
, et al.
·
Nucleic Acids Research
·
7
PDF
Accurate affinity models for SH2 domains from peptide binding assays and free‐energy regression
2025
·
Dejan Gagoski
, H. Tomas Rube
, et al.
·
Protein Science
·
3
PDF
Quantifying sequence readout by transcription factors through principled analysis of high-throughput SELEX data
2019
·
H. Tomas Rube
, Chaitanya Rastogi
, et al.
·
Bulletin of the American Physical Society
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Works count:
23
Citation count:
982
H-index:
13
I10-index:
13
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