Get started
Author

Gita Mahmoudabadi

The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans
2022 · Robert C. Jones, Jim Karkanias, et al. · Science · 1,046
PDF
Energetic cost of building a virus
2017 · Gita Mahmoudabadi, Ron Milo, et al. · Proceedings of the National Academy of Sciences · 134
PDF
Cell types of origin of the cell-free transcriptome
2022 · Sevahn K. Vorperian, Mira N. Moufarrej, et al. · Nature Biotechnology · 105
PDF
A comprehensive and quantitative exploration of thousands of viral genomes
2018 · Gita Mahmoudabadi, Rob Phillips · eLife · 95
Intrinsically disordered proteins and conformational noise
2012 · Gita Mahmoudabadi, Krithika Rajagopalan, et al. · Cell Cycle · 55
PDF
A Cross-Species Generative Cell Atlas Across 1.5 Billion Years of Evolution: The TranscriptFormer Single-cell Model
2025 · James D Pearce, Sara E Simmonds, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 31
PDF
Strand displacement in DNA-based materials systems
2013 · Bryan A. Baker, Gita Mahmoudabadi, et al. · Soft Matter · 24
TranscriptFormer: A generative cell atlas across 1.5 billion years of evolution
2026 · James D. Pearce, Sara E. Simmonds, et al. · Science · 18
Defining the Energetic Costs of Cellular Structures
2019 · Gita Mahmoudabadi, Rob Phillips, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 18
PDF
Single Cell Transcriptomics Reveals the Hidden Microbiomes of Human Tissues
2022 · Gita Mahmoudabadi, Sheela Crasta, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 8
PDF
Using double-stranded DNA probes to promote specificity in target capture
2012 · Bryan A. Baker, Gita Mahmoudabadi, et al. · Colloids and Surfaces B Biointerfaces · 8
Identification and spatio-temporal tracking of ubiquitous phage families in the human microbiome
2023 · Arbel D. Tadmor, Gita Mahmoudabadi, et al. · Frontiers in Microbiomes · 5
Publisher Correction: Cell types of origin of the cell-free transcriptome
2022 · Sevahn K. Vorperian, Mira N. Moufarrej, et al. · Nature Biotechnology · 3
PDF
Human Phageprints: A high-resolution exploration of oral phages reveals globally-distributed phage families with individual-specific and temporally-stable community compositions
2019 · Gita Mahmoudabadi, Kelsey Homyk, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2
PDF
Tabula Sapiens RNA velocity
2021 · Pisco, Angela, Mahmoudabadi, Gita · Figshare · 1
Author response: A comprehensive and quantitative exploration of thousands of viral genomes
2018 · Gita Mahmoudabadi, Rob Phillips · 1
Species-specific small models for cell type classification approach the performance of large single cell foundation models
2026 · Gita Mahmoudabadi, Lakshmi Krishnan, et al. · bioRxiv (Cold Spring Harbor Laboratory)
PDF
Machine learning models can identify individuals based on a resident oral bacteriophage family
2024 · Gita Mahmoudabadi, Kelsey Homyk, et al. · Frontiers in Microbiomes
PDF
Machine learning models of human tissue microbiomes for tissue-of-origin prediction
2024 · Gita Mahmoudabadi, Stephen R. Quake · bioRxiv (Cold Spring Harbor Laboratory)
PDF
Virology By The Numbers: A Quantitative Exploration of Viral Energetics, Genomics, and Ecology
2018 · Mahmoudabadi, Gita · CaltechTHESIS (California Institute of Technology)
A Search for the Common Words within the Voluminous Phage Vocabulary
2014 · Gita Mahmoudabadi · Biophysical Journal
PDF
The effects of sequence characteristics on competitive hybridization kinetics
2012 · Gita Mahmoudabadi · SMARTech Repository (Georgia Institute of Technology)
Inducing a Thermogenic Response to Cold Shock in E. coli
2010 · Mitesh Agrawal, Margo Clark, et al.
Works count: 23
Citation count: 1,552
H-index: 9
I10-index: 9
Year
Topic
Type