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Ying-Yuan Xie

Observed name: Yingyuan Xie
ORCID: 0000-0002-0038-2147
Observed ORCID: 0000-0002-0038-2147
OpenAlex ID: A5050899262
Systematic comparison of tools used for m6A mapping from nanopore direct RNA sequencing
2023 · Zhen-Dong Zhong, Ying-Yuan Xie, et al. · Nature Communications · 121
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Systematic calibration of epitranscriptomic maps using a synthetic modification-free RNA library
2021 · Zhang Zhang, Tao Chen, et al. · Nature Methods · 101
Single-molecule direct RNA sequencing reveals the shaping of epitranscriptome across multiple species
2025 · Ying-Yuan Xie, Zhen-Dong Zhong, et al. · Nature Communications · 42
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The m6A reader YTHDC1 regulates muscle stem cell proliferation via PI4K–Akt–mTOR signalling
2023 · Jin Liu, Hongna Zuo, et al. · Cell Proliferation · 26
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Microbiome-induced reprogramming in post-transcriptional landscape using nanopore direct RNA sequencing
2024 · Zihe Xu, Xiaoqi Zheng, et al. · Cell Reports · 13
Sequence and parent-of-origin dependent m6A contribute to allele-specific gene expression
2025 · Ying Zhang, Ze-Yu Zhang, et al. · The EMBO Journal · 4
NanoRAPID: A Deep Learning-based Framework for Single-molecule RNA Structure Analysis Using Nanopore Direct RNA Sequencing
2026 · Ze-Hui Ren, Hong-Xuan Chen, et al. · Genomics Proteomics & Bioinformatics
OpenBase: a universal framework for high-accuracy single-molecule detection of diverse non-canonical DNA bases using nanopore sequencing
2026 · Zhen-Dong Zhong, Ying-Yuan Xie, et al. · bioRxiv (Cold Spring Harbor Laboratory)
Deciphering the epitranscriptomic code of RNA degradation with nanopore direct RNA sequencing
2026 · Zhang Zhang, Chen-Long Wang, et al. · bioRxiv (Cold Spring Harbor Laboratory)
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Works count: 9
Citation count: 307
H-index: 5
I10-index: 5
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