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Mary J. Dunlop

Observed names: Dunlop Mary J., Dunlop, Mary, Dunlop, Mary J., Dunlop, Mary J.; Keasling, Jay D.; Mukhopadhyay, Aindrila, Dunlop, Mary Julia, M. J. Dunlop, M.J. Dunlop, Mary Dunlop, Mary J Dunlop, Mary J. Dunlop
Institution: Boston University
Observed institutions: Boston University, University of Vermont, California Institute of Technology, University of Arizona, Lawrence Berkeley National Laboratory, Joint BioEnergy Institute
ORCID: 0000-0002-9261-8216
Observed ORCID: 0000-0002-9261-8216
OpenAlex ID: A5062640971
Engineering microbial biofuel tolerance and export using efflux pumps
2011 · Mary J Dunlop, Zain Y Dossani, et al. · Molecular Systems Biology · 512
Engineering microbes for tolerance to next-generation biofuels
2011 · Mary J Dunlop · Biotechnology for Biofuels · 293
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DeLTA: Automated cell segmentation, tracking, and lineage reconstruction using deep learning
2020 · Jean-Baptiste Lugagne, Haonan Lin, et al. · PLoS Computational Biology · 241
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Heterogeneity in efflux pump expression predisposes antibiotic-resistant cells to mutation
2018 · Imane El Meouche, Mary J. Dunlop · Science · 240
Regulatory activity revealed by dynamic correlations in gene expression noise
2008 · Mary J Dunlop, Robert Sidney Cox, et al. · Nature Genetics · 218
Microsecond fingerprint stimulated Raman spectroscopic imaging by ultrafast tuning and spatial-spectral learning
2021 · Haonan Lin, Hyeon Jeong Lee, et al. · Nature Communications · 153
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A model for improving microbial biofuel production using a synthetic feedback loop
2010 · Mary J. Dunlop, Jay D. Keasling, et al. · Systems and Synthetic Biology · 138
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Stochastic expression of a multiple antibiotic resistance activator confers transient resistance in single cells
2016 · Imane El Meouche, Yik Siu, et al. · Scientific Reports · 120
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DeLTA 2.0: A deep learning pipeline for quantifying single-cell spatial and temporal dynamics
2022 · Owen M. O’Connor, Razan N. Alnahhas, et al. · PLoS Computational Biology · 102
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Dynamic gene expression and growth underlie cell-to-cell heterogeneity in Escherichia coli stress response
2022 · Nadia M. V. Sampaio, Caroline M. Blassick, et al. · Proceedings of the National Academy of Sciences · 85
Trade-Offs in Improving Biofuel Tolerance Using Combinations of Efflux Pumps
2014 · William J. Turner, Mary J. Dunlop · ACS Synthetic Biology · 85
Core Competencies for Undergraduates in Bioengineering and Biomedical Engineering: Findings, Consequences, and Recommendations
2020 · John A. White, Donald P. Gaver, et al. · Annals of Biomedical Engineering · 80
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Multiple Functions of a Feed-Forward-Loop Gene Circuit
2005 · Michael E. Wall, Mary J. Dunlop, et al. · Journal of Molecular Biology · 80
Bacterial persistence induced by salicylate via reactive oxygen species
2017 · Tiebin Wang, Imane El Meouche, et al. · Scientific Reports · 79
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A synthetic three-color scaffold for monitoring genetic regulation and noise
2010 · Robert Sidney Cox, Mary J Dunlop, et al. · Journal of Biological Engineering · 76
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Light-Inducible Recombinases for Bacterial Optogenetics
2020 · Michael B. Sheets, Wilson W. Wong, et al. · ACS Synthetic Biology · 59
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Design and Selection of a Synthetic Feedback Loop for Optimizing Biofuel Tolerance
2017 · Yik Siu, Jesse Fenno, et al. · ACS Synthetic Biology · 54
Synthetic Feedback Loop Model for Increasing Microbial Biofuel Production Using a Biosensor
2012 · Mary E. Harrison, Mary J. Dunlop · Frontiers in Microbiology · 53
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Distinct timescales of RNA regulators enable the construction of a genetic pulse generator
2019 · Alexandra Westbrook, Xun Tang, et al. · Biotechnology and Bioengineering · 51
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Programmable gene regulation for metabolic engineering using decoy transcription factor binding sites
2020 · Tiebin Wang, Nathan Tague, et al. · Nucleic Acids Research · 46
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Label-free nanoscopy of cell metabolism by ultrasensitive reweighted visible stimulated Raman scattering
2025 · Haonan Lin, Scott Seitz, et al. · Nature Methods · 45
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Cell-machine interfaces for characterizing gene regulatory network dynamics
2019 · Jean-Baptiste Lugagne, Mary J. Dunlop · Current Opinion in Systems Biology · 44
Tunable Stochastic Pulsing in the Escherichia coli Multiple Antibiotic Resistance Network from Interlinked Positive and Negative Feedback Loops
2013 · Javier Garcia-Bernardo, Mary J. Dunlop · PLoS Computational Biology · 41
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Deep model predictive control of gene expression in thousands of single cells
2024 · Jean-Baptiste Lugagne, Caroline M. Blassick, et al. · Nature Communications · 38
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Mathematical Modeling of RNA-Based Architectures for Closed Loop Control of Gene Expression
2018 · Deepak K. Agrawal, Xun Tang, et al. · ACS Synthetic Biology · 37
Works count: 103
Citation count: 3,681
H-index: 30
I10-index: 54
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