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Roger D. Kouyos

Observed names: D. Kouyos, Roger, Kouyos RD, Kouyos Roger D, Kouyos, R D, Kouyos, R., Kouyos, R. D., Kouyos, Roger, Kouyos, Roger D, Kouyos, Roger D., Kouyos, Roger D; https://orcid.org/0000-0002-9220-8348, Kouyos, Roger Dimitri, R D Kouyos, R KOUYOS, R Kouyos, R. D Kouyos, R. D. Kouyos, R. Kouyos, R.D. Kouyos, RD Kouyos, Roger D. Kouyos, Roger D Kouyos, Roger D. KOUYOS, Roger Dimitri Kouyos, Roger Kouyos, Roger D. Kouyos
Observed institutions: University of Geneva, University of Bern, Centre for Human Genetics, University of Basel, Princeton University, University of Zurich, Hokkaido University, University Hospital of Bern, Centre Hospitalier Universitaire Vaudois, University Hospital of Basel, ETH Zurich, University of Oxford, London School of Hygiene & Tropical Medicine, Ospedale regionale di Lugano, Kantonsspital Baselland, Klinik Hirslanden, University Hospital Zurich, Hospices Civils de Lyon, National Institute for Public Health and the Environment, University Hospital of Geneva, Azienda Ospedaliero-Universitaria di Modena, Kantonsspital Baselland Standort Bruderholz, Institute of Integrative Biology, University of Lausanne
ORCID: 0000-0002-9220-8348
Observed ORCID: 0000-0002-9220-8348
OpenAlex ID: A5069244385
Estimating the Basic Reproductive Number from Viral Sequence Data
2011 · Tanja Stadler, Roger Kouyos, et al. · Molecular Biology and Evolution · 252
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Population biological principles of drug-resistance evolution in infectious diseases
2011 · Pia Abel zur Wiesch, Roger Kouyos, et al. · The Lancet Infectious Diseases · 240
Determinants of HIV-1 reservoir size and long-term dynamics during suppressive ART
2019 · Nadine Bachmann, Chantal von Siebenthal, et al. · Nature Communications · 184
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Determinants of HIV-1 broadly neutralizing antibody induction
2016 · Peter Rusert, Roger D Kouyos, et al. · Nature Medicine · 176
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Molecular Epidemiology Reveals Long‐Term Changes in HIV Type 1 Subtype B Transmission in Switzerland
2010 · Roger D. Kouyos, Viktor von Wyl, et al. · The Journal of Infectious Diseases · 172
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Epistasis between deleterious mutations and the evolution of recombination
2007 · Roger D. Kouyos, Olin K. Silander, et al. · Trends in Ecology & Evolution · 168
The state of affairs in the kingdom of the Red Queen
2008 · M SALATHE, R KOUYOS, et al. · Trends in Ecology & Evolution · 164
Cohort Profile Update: The Swiss HIV Cohort Study (SHCS)
2021 · Alexandra U Scherrer, Anna Traytel, et al. · International Journal of Epidemiology · 145
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Contribution of a mutational bias in hepatitis C virus replication to the genetic barrier in the development of drug resistance
2011 · Megan H. Powdrill, Egor P. Tchesnokov, et al. · Proceedings of the National Academy of Sciences · 144
Ambiguous Nucleotide Calls From Population-based Sequencing of HIV-1 are a Marker for Viral Diversity and the Age of Infection
2011 · Roger D. Kouyos, Viktor von Wyl, et al. · Clinical Infectious Diseases · 140
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HIV-1 drug resistance in people on dolutegravir-based antiretroviral therapy: a collaborative cohort analysis
2023 · Tom Loosli, Stefanie Hossmann, et al. · The Lancet HIV · 131
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Prolonged persistence of measles virus RNA is characteristic of primary infection dynamics
2012 · Wen-Hsuan W. Lin, Roger D. Kouyos, et al. · Proceedings of the National Academy of Sciences · 129
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Low-frequency drug-resistant HIV-1 and risk of virological failure to first-line NNRTI-based ART: a multicohort European case–control study using centralized ultrasensitive 454 pyrosequencing
2014 · Alessandro Cozzi-Lepri, Marc Noguera-Julian, et al. · Journal of Antimicrobial Chemotherapy · 126
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Stochastic or deterministic: what is the effective population size of HIV-1?
2006 · Roger D. Kouyos, Christian L. Althaus, et al. · Trends in Microbiology · 122
Phylogenetic Approach Reveals That Virus Genotype Largely Determines HIV Set-Point Viral Load
2010 · Samuel Alizon, Viktor von Wyl, et al. · PLoS Pathogens · 120
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Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiver
2018 · Chris Wymant, François Blanquart, et al. · Virus Evolution · 100
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Exploring the Complexity of the HIV-1 Fitness Landscape
2012 · Roger D. Kouyos, Gabriel E. Leventhal, et al. · PLoS Genetics · 100
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Rapid Parasite Adaptation Drives Selection for High Recombination Rates
2007 · Marcel Salathé, Roger D. Kouyos, et al. · Evolution · 95
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Frequency and Spectrum of Unexpected Clinical Manifestations of Primary HIV-1 Infection
2015 · Dominique L. Braun, Roger D. Kouyos, et al. · Clinical Infectious Diseases · 93
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Cycling Empirical Antibiotic Therapy in Hospitals: Meta-Analysis and Models
2014 · Pia Abel zur Wiesch, Roger Kouyos, et al. · PLoS Pathogens · 92
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Inferring Epidemic Contact Structure from Phylogenetic Trees
2012 · Gabriel E. Leventhal, Roger Kouyos, et al. · PLoS Computational Biology · 91
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Bottleneck-induced transitions in a minimal model for intracellular transport
2006 · Paolo Pierobon, Mauro Mobilia, et al. · Physical Review E · 91
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Hepatitis C virus transmission among human immunodeficiency virus‐infected men who have sex with men: Modeling the effect of behavioral and treatment interventions
2016 · Luisa Salazar‐Vizcaya, Roger D. Kouyos, et al. · Hepatology · 90
Treatment-Naive Individuals Are the Major Source of Transmitted HIV-1 Drug Resistance in Men Who Have Sex With Men in the Swiss HIV Cohort Study
2013 · Sara M. Drescher, Viktor von Wyl, et al. · Clinical Infectious Diseases · 86
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The path of least resistance: aggressive or moderate treatment?
2014 · Roger D. Kouyos, C. Jessica E. Metcalf, et al. · Proceedings of the Royal Society B Biological Sciences · 85
Works count: 600
Citation count: 10,720
H-index: 53
I10-index: 250
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