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Author

Noora Aho

Observed name: Aho, Noora
ORCID: 0009-0008-1243-0215
Observed ORCID: 0009-0008-1243-0215
OpenAlex ID: A5073993306
Scalable Constant pH Molecular Dynamics in GROMACS
2022 · Noora Aho, Pavel Buslaev, et al. · Journal of Chemical Theory and Computation · 185
Best Practices in Constant pH MD Simulations: Accuracy and Sampling
2022 · Pavel Buslaev, Noora Aho, et al. · Journal of Chemical Theory and Computation · 87
Exploring fast proton transfer events associated with lateral proton diffusion on the surface of membranes
2019 · Nadav Amdursky, Yiyang Lin, et al. · Proceedings of the National Academy of Sciences · 85
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phbuilder: A Tool for Efficiently Setting up Constant pH Molecular Dynamics Simulations in GROMACS
2024 · Anton Jansen, Noora Aho, et al. · Journal of Chemical Information and Modeling · 52
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Do All Paths Lead to Rome? How Reliable is Umbrella Sampling Along a Single Path?
2024 · Noora Aho, Gerrit Groenhof, et al. · Journal of Chemical Theory and Computation · 36
How to minimize dye-induced perturbations while studying biomembrane structure and dynamics: PEG linkers as a rational alternative
2018 · Edouard Mobarak, Matti Javanainen, et al. · Biochimica et Biophysica Acta (BBA) - Biomembranes · 33
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A spontaneous mitonuclear epistasis converging on Rieske Fe-S protein exacerbates complex III deficiency in mice
2020 · Janne Purhonen, Vladislav Grigorjev, et al. · Nature Communications · 25
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What Is the Protonation State of Proteins in Crystals? Insights from Constant pH Molecular Dynamics Simulations
2024 · Noora Aho, Gerrit Groenhof, et al. · The Journal of Physical Chemistry B · 2
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Co-Titration of Phosphatidylserine Lipids and a Channel Protein Using Constant pH Molecular Dynamics
2026 · Ernesto Tavares-Neto, Marcel Aguilella-Arzo, et al. · ChemRxiv
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Supplementary input files for PS/OmpF titration using CpHMD
2026 · Aho, Noora, Tavares Neto, Ernesto · Zenodo (CERN European Organization for Nuclear Research)
Supplementary input files for fatty acid CpHMD simulations
2026 · Aho, Noora · Zenodo (CERN European Organization for Nuclear Research)
Input files for CpHMD fatty acid membrane simulations
2026 · Aho, Noora · Zenodo (CERN European Organization for Nuclear Research)
Surface charge mosaic of a water-soluble Au25(p-MBA)18 nanocluster induced by environment’s pH
2026 · Miia M. Moilanen, Noora Aho, et al. · ChemRxiv
Protein Titration Benchmark of CHARMM36, Amber99sb-ildn, Amber14sb, OPLS-AA/M, and Martini 2 Force Fields for Constant pH Molecular Dynamics in GROMACS
2026 · Noora Aho · Journal of Chemical Theory and Computation
Protein titration benchmark of CHARMM36, Amber99sb-ildn, OPLS-AA/M, and Martini 2 force fields for constant pH molecular dynamics in GROMACS
2026 · Noora Aho · ChemRxiv
Input files for CpHMD GROMACS protein titration benchmark
2026 · Aho, Noora · Zenodo (CERN European Organization for Nuclear Research)
BPS2026 – Simulating pH-dependent membrane behavior through co-titration of proteins and lipids in CpHMD
2026 · Ernesto Tavares Neto, Noora Aho, et al. · Biophysical Journal
FhuA/LDAO CV-SAXS simulation data
2025 · Aho, Noora · Zenodo (CERN European Organization for Nuclear Research)
Do all roads lead to Rome? Convergence issues in umbrella sampling simulations
2023 · Noora Aho, Gerrit Groenhof, et al. · ChemRxiv
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Umbrella sampling
2023 · Aho, Noora · Zenodo (CERN European Organization for Nuclear Research)
Using Lambda Dynamics to Study Protonation States of GLIC
2021 · Paul Bauer, Noora Aho, et al. · Biophysical Journal
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Computational Study of Lipid–Protein Interactions of Cytochrome bc1 Using Atomistic Molecular Dynamics Simulations
2017 · Noora Aho · Työväentutkimus Vuosikirja
Works count: 25
Citation count: 505
H-index: 7
I10-index: 7
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