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Fengkai Zhang

SBML Level 3: an extensible format for the exchange and reuse of biological models
2020 · Sarah M Keating, Dagmar Waltemath, et al. · Molecular Systems Biology · 301
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The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2
2019 · Michael Hucka, Frank T. Bergmann, et al. · Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics · 281
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PATRIC: The VBI PathoSystems Resource Integration Center
2006 · E. E. Snyder, N. Kampanya, et al. · Nucleic Acids Research · 149
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Deep Neural Network-Based Permittivity Inversions for Ground Penetrating Radar Data
2021 · Yintao Ji, Fengkai Zhang, et al. · IEEE Sensors Journal · 96
Computational modeling of cellular signaling processes embedded into dynamic spatial contexts
2012 · Bastian R Angermann, Frederick Klauschen, et al. · Nature Methods · 94
Forward modelling and imaging of ground‐penetrating radar in tunnel ahead geological prospecting
2018 · Bin Liu, Fengkai Zhang, et al. · Geophysical Prospecting · 77
Arbitrarily-oriented tunnel lining defects detection from Ground Penetrating Radar images using deep Convolutional Neural networks
2021 · Jing Wang, Jiaqi Zhang, et al. · Automation in Construction · 67
Forward Modelling and GPR Imaging in Leakage Detection and Grouting Evaluation in Tunnel Lining
2019 · Chunjin Lin, Xintong Wang, et al. · KSCE Journal of Civil Engineering · 50
MmWave Radar and Vision Fusion for Object Detection in Autonomous Driving: A Review
2022 · Zhiqing Wei, Fengkai Zhang, et al. · Sensors · 43
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The influence of neighboring-nucleotide composition on single nucleotide polymorphisms (SNPs) in the mouse genome and its comparison with human SNPs
2004 · Fengkai Zhang, Zhongming Zhao · Genomics · 41
The Simmune Modeler visual interface for creating signaling networks based on bi-molecular interactions
2013 · Fengkai Zhang, Bastian R. Angermann, et al. · Bioinformatics · 38
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Sequence context analysis of 8.2 million single nucleotide polymorphisms in the human genome
2005 · Zhongming Zhao, Fengkai Zhang · Gene · 38
BioSimulators: a central registry of simulation engines and services for recommending specific tools
2022 · Bilal Shaikh, Lucian P Smith, et al. · Nucleic Acids Research · 34
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Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)
2014 · Dagmar Waltemath, Frank T. Bergmann, et al. · Standards in Genomic Sciences · 30
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Sequence context analysis in the mouse genome: Single nucleotide polymorphisms and CpG island sequences
2005 · Zhongming Zhao, Fengkai Zhang · Genomics · 24
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SBML Level 3 package: Multistate, Multicomponent and Multicompartment Species, Version 1, Release 1
2018 · Fengkai Zhang, Martin Meier-Schellersheim · Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics · 21
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NetworkViewer: visualizing biochemical reaction networks with embedded rendering of molecular interaction rules
2014 · Hsueh-Chien Cheng, Bastian R Angermann, et al. · BMC Systems Biology · 18
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Semisupervised Deep Neural Network-Based Cross-Frequency Ground-Penetrating Radar Data Inversion
2023 · Hanchi Liu, Jing Wang, et al. · IEEE Transactions on Geoscience and Remote Sensing · 16
Full-waveform inversion method for tunnel seismic forward prospecting
2022 · Bin Liu, Zhifei Gong, et al. · Geophysical Journal International · 15
Full waveform inversion based on inequality constraint for cross-hole radar
2019 · Bin Liu, Fengkai Zhang, et al. · Journal of Applied Geophysics · 14
Systems biology markup language (SBML) level 3 package: multistate, multicomponent and multicompartment species, version 1, release 2
2020 · Fengkai Zhang, Lucian P. Smith, et al. · Berichte aus der medizinischen Informatik und Bioinformatik/Journal of integrative bioinformatics · 13
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Geological ahead-prospecting method while TBM drilling using improved seismic interferometry method: A case
2023 · Lei Chen, Lei Hao, et al. · Journal of Applied Geophysics · 12
Correction to: Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)
2018 · Dagmar Waltemath, Frank T. Bergmann, et al. · Standards in Genomic Sciences · 12
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Full waveform inversion of common-offset ground-penetrating radar based on a special source wavelet and multiple integral wave-field transform
2022 · Chao Fu, Yuchen Jiang, et al. · Journal of Applied Geophysics · 10
Multi-task deep learning for multi-parameter elastic inversion
2025 · Duo Li, Peng Jiang, et al. · Acta Geophysica · 9
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Works count: 37
Citation count: 1,536
H-index: 17
I10-index: 24
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