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Raviteja Vangara
Observed names:
R Vangara,
R. Vangara,
Vangara, Raviteja
Institutions:
Los Alamos National Laboratory,
University of New Mexico,
University of California San Diego
Observed institutions:
Los Alamos National Laboratory,
University of New Mexico,
University of California San Diego,
Moores Cancer Center
ORCID:
0000-0001-5272-6207
Observed ORCID:
0000-0001-5272-6207
OpenAlex ID:
A5082559067
Uncovering novel mutational signatures by de novo extraction with SigProfilerExtractor
2022
·
S.M. Ashiqul Islam
, Marcos Díaz-Gay
, et al.
·
Cell Genomics
·
365
Assigning mutational signatures to individual samples and individual somatic mutations with SigProfilerAssignment
2023
·
Marcos Díaz-Gay
, Raviteja Vangara
, et al.
·
Bioinformatics
·
187
PDF
Geographic and age variations in mutational processes in colorectal cancer
2025
·
Marcos Díaz-Gay
, Wellington dos Santos
, et al.
·
Nature
·
172
Geographic variation of mutagenic exposures in kidney cancer genomes
2024
·
Sergey Senkin
, Sarah Moody
, et al.
·
Nature
·
84
PDF
The mutagenic forces shaping the genomes of lung cancer in never smokers
2025
·
Marcos Díaz-Gay
, Tongwu Zhang
, et al.
·
Nature
·
61
Finding the Number of Latent Topics With Semantic Non-Negative Matrix Factorization
2021
·
Raviteja Vangara
, Manish Bhattarai
, et al.
·
IEEE Access
·
37
PDF
The complexity of tobacco smoke-induced mutagenesis in head and neck cancer
2025
·
Laura Torrens
, Sarah Moody
, et al.
·
Nature Genetics
·
33
Distributed non-negative matrix factorization with determination of the number of latent features
2020
·
Gopinath Chennupati
, Raviteja Vangara
, et al.
·
The Journal of Supercomputing
·
29
PDF
A neural network for determination of latent dimensionality in Nonnegative Matrix Factorization
2020
·
Benjamin Nebgen
, Raviteja Vangara
, et al.
·
Machine Learning Science and Technology
·
27
PDF
Visualizing and exploring patterns of large mutational events with SigProfilerMatrixGenerator
2023
·
Azhar Khandekar
, Raviteja Vangara
, et al.
·
BMC Genomics
·
26
PDF
Electrolyte solution structure and its effect on the properties of electric double layers with surface charge regulation
2016
·
R. Vangara
, D.C.R. Brown
, et al.
·
Journal of Colloid and Interface Science
·
25
Semantic Nonnegative Matrix Factorization with Automatic Model Determination for Topic Modeling
2020
·
Raviteja Vangara
, Erik Skau
, et al.
·
IEEE International Conference on Machine Learning and Applications (ICMLA)
·
20
Ionic solvation and solvent-solvent interaction effects on the charge and potential distributions in electric double layers
2017
·
R. Vangara
, F. van Swol
, et al.
·
The Journal of Chemical Physics
·
18
Distributed Non-Negative Tensor Train Decomposition
2020
·
Manish Bhattarai
, Gopinath Chennupati
, et al.
·
IEEE High Performance Extreme Computing Conference
·
14
PDF
The mutagenic forces shaping the genomic landscape of lung cancer in never smokers
2024
·
Marcos Díaz-Gay
, Tongwu Zhang
, et al.
·
medRxiv
·
12
APOBEC affects tumor evolution and age at onset of lung cancer in smokers
2025
·
Tongwu Zhang
, Jian Sang
, et al.
·
Nature Communications
·
11
PDF
Coulombic and non-Coulombic effects in charge-regulating electric double layers
2019
·
R Vangara
, K Stoltzfus
, et al.
·
Materials Research Express
·
11
PDF
Non-Negative Matrix Factorization for Selection of Near-Native Protein Tertiary Structures
2019
·
Nasrin Akhter
, Raviteja Vangara
, et al.
·
IEEE International Conference on Bioinformatics and Biomedicine (BIBM)
·
9
Solvophilic and solvophobic surfaces and non-Coulombic surface interactions in charge regulating electric double layers
2018
·
R. Vangara
, F. van Swol
, et al.
·
The Journal of Chemical Physics
·
9
Classical density functional analysis of the ionic size effects on the properties of charge regulating electric double layers
2021
·
D. J. Prakash
, L. Denoyer
, et al.
·
Molecular Physics
·
6
Improved Protein Decoy Selection via Non-Negative Matrix Factorization
2021
·
Nasrin Akhter
, Kazi Lutful Kabir
, et al.
·
IEEE Transactions on Computational Biology and Bioinformatics
·
6
Decoy Selection in Protein Structure Determination via Symmetric Non-negative Matrix Factorization
2020
·
Kazi Lutful Kabir
, Gopinath Chennupati
, et al.
·
IEEE International Conference on Bioinformatics and Biomedicine (BIBM)
·
6
APOBEC shapes tumor evolution and age at onset of lung cancer in smokers
2024
·
Tongwu Zhang
, Jian Sang
, et al.
·
bioRxiv (Cold Spring Harbor Laboratory)
·
5
PDF
Geographic variation of mutagenic exposures in kidney cancer genomes
2023
·
Sergey Senkin
, Sarah Moody
, et al.
·
medRxiv
·
5
PDF
Nonnegative Tensor-Train Low-Rank Approximations of the Smoluchowski Coagulation Equation
2022
·
Gianmarco Manzini
, Erik Skau
, et al.
·
Lecture notes in computer science
·
4
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Works count:
36
Citation count:
1,181
H-index:
14
I10-index:
17
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