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John D. Kececioglu

Observed names: J D Kececioglu, J. D. Kececioglu, J. Kececioglu, JOHN D. KECECIOGLU, JOHN KECECIOGLU, John Dimitri Kececioglu, John Kececioglu, Kececioglu, John, Kececioglu, John D.
Observed institutions: National Institutes of Health, University of Arizona, Max Planck Society, University of Georgia, University of California System, National Institute of Diabetes and Digestive and Kidney Diseases, University of California, Davis
ORCID: 0000-0003-1204-6535
Observed ORCID: 0000-0003-1204-6535
OpenAlex ID: A5083998316
A tool for multiple sequence alignment.
1989 · D J Lipman, S F Altschul, et al. · Proceedings of the National Academy of Sciences · 510
Exact and approximation algorithms for sorting by reversals, with application to genome rearrangement
1995 · J. Kececioglu, D. Sankoff · Algorithmica · 306
Multiple alignment by aligning alignments
2007 · Travis J. Wheeler, John D. Kececioglu · Bioinformatics · 244
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Combinatorial algorithms for DNA sequence assembly
1995 · J. D. Kececioglu, E. W. Myers · Algorithmica · 235
Improving the Practical Space and Time Efficiency of the Shortest-Paths Approach to Sum-of-Pairs Multiple Sequence Alignment
1995 · SANDEEP K. GUPTA, JOHN D. KECECIOGLU, et al. · Journal of Computational Biology · 174
Dynamic path-based software watermarking
2004 · C. Collberg, E. Carter, et al. · ACM SIGPLAN Conference on Programming Language Design and Implementation (PLDI) · 150
Machine-learning-based Brokers for Real-time Classification of the LSST Alert Stream
2018 · Gautham Narayan, Tayeb Zaidi, et al. · The Astrophysical Journal Supplement Series · 118
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The maximum weight trace problem in multiple sequence alignment
2005 · John Kececioglu · Springer eBooks · 115
Efficient bounds for oriented chromosome inversion distance
1994 · John Kececioglu, David Sankoff · Lecture notes in computer science · 114
Of mice and men: Algorithms for evolutionary distances between genomes with translocation
· John Kececioglu, R. Ravi · 93
The ANTARES Astronomical Time-domain Event Broker
2021 · Thomas Matheson, Carl Stubens, et al. · The Astronomical Journal · 91
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Exact and approximation algorithms for the inversion distance between two chromosomes
2005 · John Kececioglu, David Sankoff · Springer eBooks · 81
A branch-and-cut algorithm for multiple sequence alignment
1997 · K. Reinert, H.-P. Lenhof, et al. · Research in Computational Molecular Biology · 70
Steiner Points in the Space of Genome Rearrangements
1996 · DAVID SANKOFF, GOPALAKRISHNAN SUNDARAM, et al. · International Journal of Foundations of Computer Science · 63
A polyhedral approach to sequence alignment problems
2000 · John D. Kececioglu, Hans-Peter Lenhof, et al. · Discrete Applied Mathematics · 57
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Exact and approximation algorithms for DNA sequence reconstruction
1992 · John Kececioglu · UA Campus Repository (The University of Arizona) · 54
Aligning alignments exactly
2004 · John Kececioglu, Dean Starrett · Research in Computational Molecular Biology · 53
Reconstructing a history of recombinations from a set of sequences
1998 · John Kececioglu, Dan Gusfield · Discrete Applied Mathematics · 45
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Simple and Fast Inverse Alignment
2006 · John Kececioglu, Eagu Kim · Lecture notes in computer science · 36
HIV-1 Encodes a Sequence Overlappingenv gp41 With Highly Significant Similarity to Selenium-Dependent Glutathione Peroxidases
1997 · Ethan Will Taylor, Ajita Bhat, et al. · Journal of Acquired Immune Deficiency Syndromes & Human Retrovirology · 32
Aligning alignments
1998 · John D. Kececioglu, Weiqing Zhang · Lecture notes in computer science · 31
ANTARES: a prototype transient broker system
2014 · Abhijit Saha, Thomas Matheson, et al. · Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE · 30
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Accuracy Estimation and Parameter Advising for Protein Multiple Sequence Alignment
2013 · John Kececioglu, Dan DeBlasio · Journal of Computational Biology · 29
A Branch-and-Cut Approach to Physical Mapping of Chromosomes by Unique End-Probes
1997 · THOMAS CHRISTOF, MICHAEL JÜNGER, et al. · Journal of Computational Biology · 29
Dynamic path-based software watermarking
2004 · C. Collberg, E. Carter, et al. · ACM SIGPLAN Notices · 23
Works count: 115
Citation count: 3,162
H-index: 24
I10-index: 43
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