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Satyanarayan Rao

Observed names: Rao, Satyanarayan, Rao, Satyanarayan (author), S. R. V. Rao, S.R. Rao
ORCID: 0000-0001-7678-3505
Observed ORCID: 0000-0001-7678-3505
OpenAlex ID: A5084863313
Systematic prediction of DNA shape changes due to CpG methylation explains epigenetic effects on protein–DNA binding
2018 · Satyanarayan Rao, Tsu-Pei Chiu, et al. · Epigenetics & Chromatin · 93
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Genome-wide prediction of minor-groove electrostatic potential enables biophysical modeling of protein–DNA binding
2017 · Tsu-Pei Chiu, Satyanarayan Rao, et al. · Nucleic Acids Research · 82
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Cooperative binding between distant transcription factors is a hallmark of active enhancers
2021 · Satyanarayan Rao, Kami Ahmad, et al. · Molecular Cell · 77
Transcription factor–nucleosome dynamics from plasma cfDNA identifies ER-driven states in breast cancer
2022 · Satyanarayan Rao, Amy L. Han, et al. · Science Advances · 32
Physicochemical models of protein–DNA binding with standard and modified base pairs
2023 · Tsu-Pei Chiu, Satyanarayan Rao, et al. · Proceedings of the National Academy of Sciences · 28
22 Evolving insights on how cytosine methylation affects protein-DNA binding
2015 · Satyanarayan Rao, Ana Carolina Dantas Machado, et al. · Journal of Biomolecular Structure and Dynamics · 21
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The RNA Polymerase α Subunit Recognizes the DNA Shape of the Upstream Promoter Element
2020 · Samuel Lara-Gonzalez, Ana Carolina Dantas Machado, et al. · Biochemistry · 19
Phenotypes from cell-free DNA
2020 · Alexis Zukowski, Satyanarayan Rao, et al. · Open Biology · 17
5-Methylcytosine content in Gryllotalpa fossor (Orthoptera)
1992 · Soma Sarkar, S. R. V. Rao, et al. · Genome · 16
Estradiol (E2) concentration shapes the chromatin binding landscape of estrogen receptor alpha
2025 · Amy L. Han, Kiran Vinod Paul, et al. · Journal of Biological Chemistry · 2
A computational pipeline to visualize DNA-protein binding states using dSMF data
2022 · Satyanarayan Rao, Srinivas Ramachandran · STAR Protocols · 1
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Conformational activation of GSK3β by an environmental toxicant suppresses hedgehog signalling and disrupts ciliary homeostasis
2026 · Ravikant Piyush, Himani Barmola, et al. · bioRxiv (Cold Spring Harbor Laboratory)
Endosulfan rewires GSK3β to disrupt primary cilia-dependent Hedgehog signalling
2026 · Ravikant Piyush, Himani Barmola, et al. · bioRxiv (Cold Spring Harbor Laboratory)
FXYD3: A Key Regulator of Ion Homeostasis and Redox Balance in Cancer Biology
2026 · Megha Gupta, Satyanarayan Rao, et al. · Current Drug Targets
Structural basis of substrate recognition and conformational gating in the bacteriophage M15 metalloendopeptidase LysPH
2026 · Dhruv Pahwa, Sakshi Pandey, et al. · bioRxiv (Cold Spring Harbor Laboratory)
Robust Association of Breast Cancer Co-morbidity Using Subtype-specific Expressed Genes
2026 · Megha Gupta, Surekha Verma, et al. · Current Drug Targets
SMTrackR: an R/Bioconductor package for mapping protein binding at individual DNA molecules
2026 · Aashna Bansal, Himani Barmola, et al. · Bioinformatics Advances
Using cell-free DNA to predict response to immunotherapy in non-small cell lung cancer pre- and post-treatment.
2023 · Satyanarayan Rao, Alexis Zukowski, et al. · Journal of Clinical Oncology
Abstract 2611: Transcription factor-nucleosome dynamics inferred from plasma cfDNA delineates tumor and tumor-microenvironment phenotype
2021 · Satyanarayan Rao, Amy Han, et al. · Cancer Research
Author response for "Phenotypes from cell-free DNA"
2020 · Alexis Zukowski, Satyanarayan Rao, et al. · Publons reviews and discussion
Zinc finger 2 from the transcription factor Sp1 DNA binding domain
2019 · S.R. Rao, W.S. Horne · Worldwide Protein Data Bank
Backbone-modified variant of zinc finger 2 from the transcription factor Sp1 DNA binding domain: D-Pro in the metal-binding turn
2019 · S.R. Rao, W.S. Horne · Worldwide Protein Data Bank
Backbone-modified variant of zinc finger 2 from the transcription factor Sp1 DNA binding domain: altered helix, loop, turn, and sheet
2019 · S.R. Rao, W.S. Horne · Worldwide Protein Data Bank
MOESM7 of Systematic prediction of DNA shape changes due to CpG methylation explains epigenetic effects on proteinâ DNA binding
2018 · Satyanarayan Rao, Tsu-Pei Chiu, et al. · Figshare
The Rab Method in North Cuddapah
1934 · Satyanarayan Rao · Indian Forester
Works count: 41
Citation count: 388
H-index: 9
I10-index: 9
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